Publications and Research
Works from 2019
Advances in geometric techniques for analyzing blebbing in chemotaxing Dictyostelium cells, Zully Santiago, John Loustau, David Meretzky, Devarshi Rawal, and Derrick Brazill
Examination of Human Health Impacts Due to Adverse Climate Events Through the Use of Vulnerability Mapping: A Scoping Review, Michael T. Schmeltz and Peter J. Marcotullio
Changes in Functional Connectivity Following Treatment With Emotion Regulation Therapy, Matthew A. Scult, David M. Fresco, Faith M. Gunning, Conor Liston, Saren H. Seeley, Emmanuel Garcia, and Douglas S. Mennin
Bilingualism, executive function, and beyond: Questions and insights, Irina A. Sekerina, Lauren Spradlin, and Virginia V. Valian
'Constructing Global Order: Agency and Change in World Politics' by Amitav Acharya (review), Zachary C. Shirkey
Social Justice, Debbie Sonu
The Outsider Within: Thoughts and Musings on Exclusion as Stranger-Making, Debbie Sonu
Effects of the KCNQ channel opener ezogabine on functional connectivity of the ventral striatum and clinical symptoms in patients with major depressive disorder, Aaron Tan, Sara Costi, Laurel S. Morris, Nicholas T. Van Dam, Marin Kautz, Alexis E. Whitton, Allyson K. Friedman, Katherine A. Collins, Gabriella Ahle, Nisha Chadha, Brian Do, Diego A. Pizzagalli, Dan V. Iosifescu, Eric J. Nestler, Ming-Hu Han, and James W. Murrough
Dominion Road in Auckland, New Zealand and Chinese Community, Wendy W. Tan
Incheon Chinatown: Cultural Heritage of this Korea's First Chinatown, Wendy W. Tan
Crowd wisdom enhanced by costly signaling in a virtual rating system, Ofer Tchernichovski, Lucas C. Parra, Daniel Fimiarz, Arnon Lotem, and Dalton Conley
Extreme events reveal an alimentary limit on sustained maximal human energy expenditure, Caitlin Thurber, Lara R. Dugas, Cara Ocobock, Bryce Carlson, John R. Speakman, and Herman Pontzer
Works from 2018
Fair Use as Creative Muse: An Ongoing Case Study, Malin Abrahamsson and Stephanie Margolin
GIS Project Management, Jochen Albrecht
Open Source Foundations for Spatial Decision Support Systems, Jochen Albrecht
Enabling precision medicine via standard communication of HTS provenance, analysis, and results, Gil Alterovitz, Dennis Dean, Carole Globe, Michael R. Crusoe, Stiam Soiland-Reyes, Amanda Bell, Anais Hayes, Anita Suresh, Anjan Purkkayastha, Charles H. King, Dan Taylor, Elaine Johanson, Elaine E. Thompson, Eric Donaldson, Hiroki Morizono, Hsinyi Tsang, Jeet K. Vora, Jeremy Goecks, Jianchao Yao, Jonas S. Almeida, Jonathon Keeney, KanakaDurga Addepalli, Konstantinos Krampis, Krista M. Smith, Lydia Guo, Mark Walderhaug, Marco Schito, Matthew Ezewudo, Nuria Guimera, Paul Walsh, Robel Kahsay, Srikanth Gottipati, Timothy C. Rodwell, Toby Bloom, Yuching Lai, Vahan Simonyan, and Raja Mazumder
Chronic voluntary oral methamphetamine induces deficits in spatial learning and hippocampal protein kinase Mzeta with enhanced astrogliosis and cyclooxygenase-2 levels, Jorge A. Avila, Roseanna M. Zanca, Denis Shor, Nicholas Paleologos, Amber A. Alliger, Maria E. Figueiredo-Pereira, and Peter A. Serrano
A description of nesting behaviors, including factors impacting nest site selection, in black‐and‐white ruffed lemurs (Varecia variegata), Andrea L. Baden
Facilitating Video Analysis for Teacher Development: A Systematic Review of the Research, Laura H. Baecher, Shiao-Chuan Kung, Sarah Laleman Ward, and Kimberly Kern
Bad Bunny, Good Scapegoat: How 'El Conejo Malo' Is Stirring a 'Moral Panic' in Post-Hurricane Puerto Rico, Yarimar Bonilla
Leveraging PET to image folate receptor α therapy of an antibody-drug conjugate, Christian Brand, Ahmad Sadique, Jacob L. Houghton, Kishore Gangagari, Jose F. Ponte, Jason S. Lewis, Naga Vara Kishore Pillarsetty, Joseph A. Konner, and Thomas Reiner
A systematic review of non-pharmacological interventions to improve nighttime sleep among residents of long-term care settings, Elizabeth Capezuti, Rana Sagha Zadeh, Kevin Pain, Aleksa Basara, Nancy Ziyan Jiang, and Ana C. Krieger
Target engagement imaging of PARP inhibitors in small-cell lung cancer, Brandon Carney, Susanne Kossatz, Benjamin H. Lok, Valentina Schneeberger, Kishore K. Gangangari, Naga Vara Kishore Pillarsetty, Wolfgang A. Weber, Charles M. Rudin, John T. Poirier, and Thomas Reiner
Primordial origin and diversification of plasmids in Lyme disease agent bacteria, Sherwood R. Casjens, Lia Di, Saymon Akther, Emmanuel F. Mongodin, Benjamin J. Luft, Steven E. Schutzer, Claire M. Fraser, and Weigang Qiu
Prostaglandin D2/J2 signaling pathway in a rat model of neuroinflammation displaying progressive parkinsonian-like pathology: potential novel therapeutic targets, Chuhyon Corwin, Anastasia Nikolopoulou, Allen L. Pan, Mariela Nunez-Santos, Shankar Vallabhajosula, Peter A. Serrano, John Babich, and Maria E. Figueiredo-Pereira
The algorithmic rise of the “alt-right”, Jessie Daniels
W.E.B. DuBois for the Twenty‐First Century: On Being a Scholar‐Activist in the Digital Era, Jessie Daniels
When the Far-Right Attacks Faculty Online, They are Attacking Public Higher Education, Jessie Daniels
White Women, U.S. Popular Culture, and Narratives of Addiction, Jessie Daniels
Single olfactory receptors set odor detection thresholds, Adam Dewan, Annika Cichy, Jingji Zhang, Kayla Miguel, Paul Feinstein, Dmitry Rinberg, and Thomas Bozza
Use and Awareness of Library Services among Faculty at Two Armenian Universities, D. Aram Donabedian, John Carey, and Arshak Balayan
Discriminating radiation injury from recurrent tumor with [18F]PARPi and amino acid PET in mouse models, Patrick L. Donabedian, Susanne Kossatz, John A. Engelbach, Stephen A. Jannetti, Brandon Carney, Robert J. Young, Wolfgang A. Weber, Joel R. Garbow, and Thomas Reiner
‘Haciendas and Plantations’: History and limitations of a 60-year-old taxonomy, Marc Edelman
Using Drosophila behavioral assays to characterize terebrid venompeptide bioactivity, Anders Eriksson, Prachi Anand, Juliette Gorson, Corina Grijuc, Elina Hadelia, James C. Stewart, Mandë Holford, and Adam Claridge-Chang
LIM Protein Ajuba associates with the RPA complex through direct cell cycle-dependent interaction with the RPA70 subunit, Sandy Fowler, Pascal Maguin, Sampada Kalan, and Diego Loayza
Ten Years of Food Policy Governance in New York City: Lessons for the Next Decade, Nicholas Freudenberg, Nevin Cohen, Janet Poppendieck, and Craig Willingham
Disparities in pulmonary fibrosis care in the United States: an analysis from the Nationwide Inpatient Sample, Adam W. Gaffney, Steffie Woolhander, David Himmelstein, and Danny McCormick
TMSOTf assisted synthesis of 2’-deoxy-2’-[18F] fluoro-β-D-arabinofuranosylcytosine ([18F] FAC), Kishore K. Gangangari, John L. Humm, Steven M. Larson, and Naga Vara Kishore Pillarsetty
Evolution of the modern baboon (Papio hamadryas): A reassessment of the African Plio-Pleistocene record, Christopher C. Gilbert, Stephen R. Frost, Kelsey D. Pugh, Monya Anderson, and Eric Delson
Building Brand Kurdistan: Helly Luv, the Gender of Nationhood, and the War on Terror, Nicholas S. Glastonbury
BpWrapper: BioPerl-based sequence and tree utilities for rapid prototyping of bioinformatics pipelines, Yözen Hernández, Rocky Bernstein, Pedro Pagan, Levy Vargas, William McCaig, Girish Ramrattan, Saymon Akther, Amanda Larracuente, Lia Di, Filipe G. Vieira, and Weigang Qiu
A new insight into underlying disease mechanism through semi-parametric latent differential network model, Yong He, Jiadong Ji, Lei Xie, Xinsheng Zhang, and Fuzhong Xue
An Interview with Cesare Montecucco, Mandë Holford and Andreas Rummel
Thrive With Me: Protocol for a Randomized Controlled Trial to Test a Peer Support Intervention to Improve Antiretroviral Therapy Adherence Among Men Who Have Sex With Men, Keith J. Horvath, K. Rivet Amico, Darin Erickson, Alexandra M. Ecklund, Aldona Martinka, James DeWitt, Jeffrey McLaughlin, and Jeffrey T. Parsons
Designing a Summer Transition Program for Incoming and Current College Students on the Autism Spectrum: A Participatory Approach, Emily Hotez, Christina Shane-Simpson, Rita Obeid, Danielle DeNigris, Michael Siller, Corinna Costikas, Jonathan Pickens, Anthony Massa, Michael Giannola, Joanne D'Onofrio, and Kristen Gillespie-Lynch
Comparing Microbiome Sampling Methods in a Wild Mammal: Fecal and Intestinal Samples Record Different Signals of Host Ecology, Evolution, Melissa R. Ingala, Nancy B. Simmons, Claudia Wultsch, Konstantinos Krampis, Kelly A. Speer, and Susan L. Perkins
Disequilibrium, Adaptation, and the Norse Settlement of Greenland, Rowan Jackson, Jette Arneborg, Andrew Dugmore, Christian Madsen, Tom McGovern, Konrad Smiarowski, and Richard Streeter
MSW Interns at Public Libraries: Fostering Collaboration For Change, Sarah C. Johnson
Social science perspectives on drivers of and responses to global, Andrew K. Jorgenson, Shirley Fiske, Klaus Hubacek, Jia Li, Tom McGovern, Torben Rick, Juliet B. Schor, William Solecki, Richard York, and Ariela Zycherman
Not Waiting for Washington: Climate Policy Adoption in California and New York, Roger Karapin
Proactive Empirical Assessment of New Language Feature Adoption via Automated Refactoring: The Case of Java 8 Default Methods, Raffi T. Khatchadourian and Hidehiko Masuhara
Proactive Empirical Assessment of New Language Feature Adoption via Automated Refactoring: The Case of Java 8 Default Methods, Raffi T. Khatchadourian and Hidehiko Masuhara
A Tool for Optimizing Java 8 Stream Software via Automated Refactoring, Raffi T. Khatchadourian, Yiming Tang, Mehdi Bagherzadeh, and Syed Ahmed
The Relationship Between In-session Commitment Language and Daily Self-reported Commitment to Reduce or Abstain from Drinking, Alexis Kuerbis, Jessica Houser, Paul Amrhein, Hayley Treloar Padovano, and Jon Morgenstern
Exploration of Treatment Matching to Problem Drinker Characteristics With Motivational Interviewing and Non-directive Client-centered Psychotherapy for Problem Drinkers, Alexis Kuerbis, Jessica Houser, Svetlana Levak, Sijing Shao, and Jon Morgenstern
More Than Taking a Chair: The Perceived Group Social Dynamics of Alcoholics Anonymous Related to Changes in Spiritual Practices, Alexis Kuerbis and J. Scott Tonigan
Comparing Daily Drivers of Problem Drinking Among Older and Younger Adults: An Electronic Daily Diary Study Using Smartphones, Alexis Kuerbis, Hayley Treloar Padovano, Sijing Shao, Jessica Houser, Frederick Muench, and Jon Morgenstern
The effectiveness of critical time intervention for abused women leaving women’s shelters: a randomized controlled trial, Danielle A. M. Lako, Marielle D. Beijersbergen, Irene E. Jonker, Renee de Vet, Daniel B. Herman, Albert M. van Hemert, and Judith R. L. M. Wolf
Oxytocin and cancer: An emerging link, Ben Lerman, Trisheena Harricharran, and Olorunseun O. Ogunwobi
The International Conference on Intelligent Biology and Medicine (ICIBM) 2018: bioinformatics towards translational applications, Xiaoming Liu, Lei Xie, Zhijin Wu, Kai Wang, Zhongming Zhao, Jianhuan Ruan, and Degui Zhi
Structure-activity profiling of alkaloid natural product pharmacophores against a Schistosoma serotonin receptor, Jonathan S. Marchant, Wayne W. Harding, and John D. Chan
Comics, Questions, Action! Engaging Students and Instruction Librarians With the Comics-Questions Curriculum, Stephanie Margolin, Mason Brown, and Sarah Laleman Ward
Adolescent Medicine Trials Network for HIV/AIDS Interventions Data Harmonization: Rationale and Development of Guidelines, Micah McCumber, Demetria Cain, Sara LeGrand, Kenneth H. Mayer, Debra A. Murphy, Matthew A. Psioda, Arlene C. Seña, Tyrel J. Starks, and Michael Hudgens
Burning Libraries: A Community Response, Thomas H. McGovern
What is it all for? Archaeology and Global Change Research, Thomas H. McGovern
To switch or not to switch: Intentions to switch to injectable PrEP among gay and bisexual men with at least twelve months oral PrEP experience, Kathrine Meyers, Yumeng Wu, Atrina Brill, Theodorus Sandfort, and Sarit A. Golub
Day-Level Associations Between Substance Use and HIV Risk Behavior Among a Diverse Sample of Transgender Women, Brett M. Millar, Devin English, Raymond L. Moody, H. Jonathon Rendina, Demetria Cain, Nadav Antebi-Gruszka, Joseph A. Carter, and Jeffrey T. Parsons
Precocious development of self-awareness in dolphins, Rachel Morrison and Diana Reiss
Unravelling the structure of glycosyl cations via cold-ion infrared spectroscopy, Eike Mucha, Mateusz Marianski, Fei-Fei Xu, Daniel A. Thomas, Gerard Meijer, Gert von Helden, Peter H. Seeberger, and Kevin Pagel
Review of Recent Nuclear Magnetic Resonance Studies of Ion Transport in Polymer Electrolytes, Stephen Munoz and Steven Greenbaum
“Our lab is the community”: Defining essential supporting infrastructure in engagement research, Donald E. Nease Jr., Dee Burton, Sarah L. Cutrona, Lauren Edmundson, Alex H. Krist, Michael Barton Laws, and Montelle Tamez
Developmental transitions in amygdala PKC isoforms and AMPA receptor expression associated with threat memory in infant rats, Maya Opendak, Roseanna M. Zanca, Eben Anane, Peter Serrano, and Regina M. Sullivan
Age-Tastic! An Evaluation of an Evidence-Based Intervention for Older Adults, Manoj Pardasani, Jackie Berman, and Mebane Powell
Empowering With PrEP (E-PrEP), a Peer-Led Social Media–Based Intervention to Facilitate HIV Preexposure Prophylaxis Adoption Among Young Black and Latinx Gay and Bisexual Men: Protocol for a Cluster Randomized Controlled Trial, Viraj V. Patel, Zoë Ginsburg, Sarit A. Golub, Keith J. Horvath, Nataly Rios, Kenneth H. Mayer, Ryunh S. Kim, and Julia H. Arnsten
Use and Awareness of Reference Management Software Among Community College Students, Ajatshatru Pathak and Sarah Johnson,
African trypanosomes evade immune clearance by Oglycosylation of the VSG surface coat, Jason Pinger, Dragana Nešić, Liaqat Ali, Francisco Aresta-Branco, Mirjana Lilic, Shanin Chowdhury, Hee-Sook Kim, Joseph Verdi, Jayne Raper, Michael A. J. Ferguson, F. Nina Papavasiliou, and C. Erec Stebbins
Predicting serious rare adverse reactions of novel chemicals, Aleksandar Poleksic and Lei Xie
Nanoparticles as multimodal photon transducers of ionizing radiation, Edwin C. Pratt, Travis M. Shaffer, Qize Zhang, Charles Michael Drain, and Jan Grimm
Phylogenetic relationships of living and fossil African papionins: Combined evidence from morphology and molecules, Kelsey D. Pugh and Christopher C. Gilbert
Essential Methods for Planning Practitioners: Skills and Techniques for Data Analysis, Visualization, and Communication, Laxmi Ramasubramanian and Jochen Albrecht
Factors associated with perceived accuracy of the Undetectable = Untransmittable slogan among men who have sex with men: Implications for messaging scale-up and implementation, H Jonathon Rendina and J T. Parsons
Strains of bacterial species induce a greatly varied acute adaptive immune response: The contribution of the accessory genome, Uri Sela, Chad W. Euler, Joel Correa da Rosa, and Vincent A. Fischetti
The Microbe Directory: An annotated, searchable inventory of microbes’ characteristics, Heba Shaaban, David A. Westfall, Rawhi Mohammad, David Danko, Daniela Bezdan, Ebrahim Afshinnekoo, Nicola Segata, and Christopher E. Mason
Explaining the Illusion of Phenomenal Consciousness, Daniel S. Shabasson
Microtubule Imaging Reveals Cytoskeletal Deficit Predisposing the Retinal Ganglion Cell Axons to Atrophy in DBA/2J, Denis Sharoukhov, Festa Bucinca-Cupallari, and Hyungsik Lim
Challenges to the Study of Long Wars, Zachary C. Shirkey
Introduction: The Puzzle of War Duration, Zachary C. Shirkey
Turning to Political Violence: The Emergence of Terrorism by Marc Sageman (review), Zachary C. Shirkey
Which Wars Spread? Commitment Problems and Military Intervention, Zachary C. Shirkey
"Homosexuals Are Revolting": Stonewall, 1969, Erin Siodmak
Maternal experiences of intimate partner violence and C-reactive protein levels in young children in Tanzania, Natalie Slopen, Jing Zhang, Samuel S. Urlacher, Gretchen De Silva, and Mona Mittal
The Sociality of Post-Truth: Neoliberal Culture and its Rationality, Debbie Sonu
Stranger-Making as Difference: Childhood Memories of Belonging and Exclusion by Undergraduates of Color, Debbie Sonu and Marissa Bellino
The Hidden Curriculum in Financial Literacy: Economics, Standards, and the Teaching of Young Children, Debbie Sonu and Anand R. Marri
Market Integration Predicts Human Gut Microbiome Attributes across a Gradient of Economic Development, Keaton Stagaman, Tara J. Cepon-Robins, Melissa A. Liebert, Theresa E. Gildner, Samuel S. Urlacher, Felicia C. Madimenos, Karen Guillemin, J. Josh Snodgrass, Lawrence S. Sugiyama, and Brendan J. M. Bohannan
GoFish: A versatile nested PCR strategy for environmental DNA assays for marine vertebrates, Mark Y. Stoeckle, Mithun Das Mishu, and Zachary Charlop-Powers
Poster: Towards safe refactoring for intelligent parallelization of Java 8 streams, Yiming Tang, Raffi T. Khatchadourian, Mehdi Bagherzadeh, and Syed Ahmed
Poster: Towards safe refactoring for intelligent parallelization of Java 8 streams, Yiming Tang, Raffi T. Khatchadourian, Mehdi Bagherzadeh, and Syed Ahmed
Chinese Garden of Friendship and Sydney’s Chinatown : Friendship and Something Beyond at Darling Harbor, Wendy W. Tan
Melbourne’s Chinatown: Continuous Chinese Enclave For 168 Years In Australia, Wendy W. Tan