Date of Degree
Doctor of Philosophy (Ph.D.)
Epidemiology and Biostatistics
Alzheimer's Disease, metabolites, Mendelian randomization
This paper uses two sample Mendelian randomizations to conduct an agnostic search of the metabolic GWAS published by Tao Long and co-workers. GWAS for AD from IGAP and from UK Biobank were used for outcomes. The author uses two sample Mendelian randomization (MR) to test for causal relationships between common blood metabolites and Alzheimer’s disease (AD). First, estimates for a set of 22 metabolites which are statistically significant for both outcome GWAS are determined. Egger regression, Mendelian Randomization Pleiotropy Residual Sum and Outlier (MRPRESSO), and weighted median regression are used as sensitivity checks. AD shares risk factors with both heart disease and cancer, and it is possible that individuals highly susceptible to AD may have died of a competing risk before recruitment into the study. To examine this further, two sample MR is used to determine if there are causal relationships the 22 metabolites and AD. Relationships are found for heart disease in 17 of the 22 metabolites, and in 2 of the metabolites for cancer. Findings strongly suggested competing risk bias in the aggregate, at least for heart disease. To determine how this general finding applied to metabolites under consideration, estimates for AD were obtained by sex. Women have a higher rate of all-cause survival than men, so any survival bias present should cause the estimates for men to be attenuated. Therefore, the UK Biobank proxy phenotype GWAS was examined by sex and the author found 15 metabolites not affected by competing risk bias. Among the blood metabolites that were examined, the best candidates for causal relationship to Alzheimer’s disease were 1-stearoyl-2-arachidonoyl-GPE (18:0/20:4), cis-4-decenoyl carnitine, and 1-palmitoyl-2-linoleoyl-GPE (16:0/18:2).
Leggio, Sal P., "Agnostic Search for Metabolites Causally Implicated in Alzheimer's Disease" (2020). CUNY Academic Works.
Available for download on Saturday, May 20, 2023