The Publications and Research series consists of scholarly and creative works (journal articles, book chapters, conference presentations, datasets, etc.) by Graduate Center faculty, students, and professional staff.

Note to Graduate Center students: Do not submit your GC dissertation, thesis, or capstone project to this section of Academic Works. Submit those works to the Dissertations, Theses, and Capstone Projects section. See the library’s deposit guide for instructions.

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Works from 2018

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Proceedings of the CUNY Games Conference 4.0: The Interactive Course, Robert O. Duncan, Joseph Bisz, Julie Sinn Cassidy, Kathleen Offenholley, Maura Smale, Carolyn Stallard, Debra Sturm, Anders A. Wallace, and CUNY Games Network

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‘Haciendas and Plantations’: History and limitations of a 60-year-old taxonomy, Marc Edelman

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Using Drosophila behavioral assays to characterize terebrid venompeptide bioactivity, Anders Eriksson, Prachi Anand, Juliette Gorson, Corina Grijuc, Elina Hadelia, James C. Stewart, Mandë Holford, and Adam Claridge-Chang

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LIM Protein Ajuba associates with the RPA complex through direct cell cycle-dependent interaction with the RPA70 subunit, Sandy Fowler, Pascal Maguin, Sampada Kalan, and Diego Loayza

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Forgiveness: An ordered pluralism, Miranda Fricker

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TMSOTf assisted synthesis of 2’-deoxy-2’-[18F] fluoro-β-D-arabinofuranosylcytosine ([18F] FAC), Kishore K. Gangangari, John L. Humm, Steven M. Larson, and Naga Vara Kishore Pillarsetty

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Phase Diagram of Water Confined by Graphene, Zhenghan Gao, Nicolas Giovambattista, and Ozgur Sahin

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Evolution of the modern baboon (Papio hamadryas): A reassessment of the African Plio-Pleistocene record, Christopher C. Gilbert, Stephen R. Frost, Kelsey D. Pugh, Monya Anderson, and Eric Delson

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Directly light-regulated binding of RGS-LOV photoreceptors to anionic membrane phospholipids, Spencer T. Glantz, Erin E. Berlew, Zaynab Jaber, Benjamin S. Schuster, Kevin H. Gardner, and Brian Y. Chow

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Building Brand Kurdistan: Helly Luv, the Gender of Nationhood, and the War on Terror, Nicholas S. Glastonbury

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Improved Student Outcomes in Biological Psychology Courses Through Scaffolded Reading and Writing Assignments., Jillian Grose-Fifer and Christopher Davis-Ferreira

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BpWrapper: BioPerl-based sequence and tree utilities for rapid prototyping of bioinformatics pipelines, Yözen Hernández, Rocky Bernstein, Pedro Pagan, Levy Vargas, William McCaig, Girish Ramrattan, Saymon Akther, Amanda Larracuente, Lia Di, Filipe G. Vieira, and Weigang Qiu

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A new insight into underlying disease mechanism through semi-parametric latent differential network model, Yong He, Jiadong Ji, Lei Xie, Xinsheng Zhang, and Fuzhong Xue

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An Interview with Cesare Montecucco, Mandë Holford and Andreas Rummel

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Thrive With Me: Protocol for a Randomized Controlled Trial to Test a Peer Support Intervention to Improve Antiretroviral Therapy Adherence Among Men Who Have Sex With Men, Keith J. Horvath, K. Rivet Amico, Darin Erickson, Alexandra M. Ecklund, Aldona Martinka, James DeWitt, Jeffrey McLaughlin, and Jeffrey T. Parsons

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Designing a Summer Transition Program for Incoming and Current College Students on the Autism Spectrum: A Participatory Approach, Emily Hotez, Christina Shane-Simpson, Rita Obeid, Danielle DeNigris, Michael Siller, Corinna Costikas, Jonathan Pickens, Anthony Massa, Michael Giannola, Joanne D'Onofrio, and Kristen Gillespie-Lynch

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The Weight of Categories: Geographically Inscribed Otherness in Botkyrka Municipality, Sweden, Beiyi Hu

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Disequilibrium, Adaptation, and the Norse Settlement of Greenland, Rowan Jackson, Jette Arneborg, Andrew Dugmore, Christian Madsen, Tom McGovern, Konrad Smiarowski, and Richard Streeter

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Identification and characterization of early photoreceptor cis-regulatory elements and their relation to Onecut1, Nathalie Jean-Charles, Diego F. Buenaventura, and Mark M. Emerson

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Pitx1 Regulates Cement Gland Development in Xenopus laevis through Activation of Transcriptional Targets and Inhibition of BMP Signaling, Ye Jin and Daniel C. Weinstein

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Water Pharmacophore: Designing Ligands using Molecular Dynamics Simulations with Water, Sang Won Jung, Minsup Kim, Steven Ramsey, Tom Kurtzman, and Art E. Cho

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Translation Control by p53, Justina Kasteri, Dibash K. Das, Xuelin Zhong, Leah Persaud, Ashleigh Francis, Hilal Muharam, and Moira Sauane

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Journey to the center of the protein: allostery from multitemperature multiconformer X-ray crystallography, Daniel A. Keedy

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Proactive Empirical Assessment of New Language Feature Adoption via Automated Refactoring: The Case of Java 8 Default Methods, Raffi T. Khatchadourian and Hidehiko Masuhara

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Proactive Empirical Assessment of New Language Feature Adoption via Automated Refactoring: The Case of Java 8 Default Methods, Raffi T. Khatchadourian and Hidehiko Masuhara

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A Tool for Optimizing Java 8 Stream Software via Automated Refactoring, Raffi T. Khatchadourian, Yiming Tang, Mehdi Bagherzadeh, and Syed Ahmed

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Assessment of a Single Decoupling Alchemical Approach for the Calculation of the Absolute Binding Free Energies of Protein-Peptide Complexes, Denise Kilburg and Emilio Gallicchio

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Hip extensor mechanics and the evolution of walking and climbing capabilities in humans, apes, and fossil hominins, Elaine E. Kozma, Nicole M. Webb, William Harcourt-Smith, David A. Raichlen, Kristiaan D’Août, Mary H. Brown, Emma M. Finestone, Stephen R. Ross, Peter Aerts, and Herman Pontzer

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Is a Meta-analytic Approach to Burnout’s Prevalence Timely?, Eric Laurent, Irvin Sam Schonfeld, and Renzo Bianchi

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On the “Bubble” of Burnout's Prevalence Estimates, Eric Laurent, Irvin Sam Schonfeld, Renzo Bianchi, Laura Hawryluck, and Peter G. Brindley

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Oxytocin and cancer: An emerging link, Ben Lerman, Trisheena Harricharran, and Olorunseun O. Ogunwobi

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What We Do Not Know about Fungal Cell Adhesion Molecules, Peter N. Lipke

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The International Conference on Intelligent Biology and Medicine (ICIBM) 2018: bioinformatics towards translational applications, Xiaoming Liu, Lei Xie, Zhijin Wu, Kai Wang, Zhongming Zhao, Jianhuan Ruan, and Degui Zhi

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Smaller Hippocampal Volume in Posttraumatic Stress Disorder: A Multisite ENIGMA-PGC Study: Subcortical Volumetry Results From Posttraumatic Stress Disorder Consortia, Mark W. Logue, Sanne JH van Rooij, Emily L. Dennis, Sarah L. Davis, and Lauren O’Connor

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Brownfields to Greenfields: Environmental Justice Versus Environmental Gentrification, Juliana A. Maantay

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Structure-activity profiling of alkaloid natural product pharmacophores against a Schistosoma serotonin receptor, Jonathan S. Marchant, Wayne W. Harding, and John D. Chan

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Estimating Recent Local Impacts of Sea‑Level Rise on Current Real‑Estate Losses: A Housing Market Case Study in Miami‑Dade, Florida, Steven A. McAlpine and Jeremy R. Porter

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To switch or not to switch: Intentions to switch to injectable PrEP among gay and bisexual men with at least twelve months oral PrEP experience, Kathrine Meyers, Yumeng Wu, Atrina Brill, Theodorus Sandfort, and Sarit A. Golub

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Day-Level Associations Between Substance Use and HIV Risk Behavior Among a Diverse Sample of Transgender Women, Brett M. Millar, Devin English, Raymond L. Moody, H. Jonathon Rendina, Demetria Cain, Nadav Antebi-Gruszka, Joseph A. Carter, and Jeffrey T. Parsons

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Where Does Public Land Come From? Municipalization and Privatization Debates, Oksana Mironova and Samuel Stein

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Precocious development of self-awareness in dolphins, Rachel Morrison and Diana Reiss

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Review of Recent Nuclear Magnetic Resonance Studies of Ion Transport in Polymer Electrolytes, Stephen Munoz and Steven Greenbaum

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Transspinal Direct Current Stimulation Produces Persistent Plasticity in Human Motor Pathways, Lynda M. Murray, Behdad Tahayori, and Maria Knikou

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Generating and repairing genetically programmed DNA breaks during immunoglobulin class switch recombination, Laura Nicolas, Montserrat Cols, Jee Eun Choi, and Jayanta Chaudhuri

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Dextran hydrogels by crosslinking with amino acid diamines and their viscoelastic properties, Naphtali A. O’Connor, Mihaela Jitianu, Greisly Nunez, Quentin Picard, Madeline Wong, David Akpatsu, Adam Negrin, Rajendra Gharbaran, Daniel Lugo, Sundus Shaker, Andrei Jitianu, and Stephen Redenti

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Component tree analysis of cystovirus φ6 nucleocapsid Cryo-EM single particle reconstructions, Lucas Oliveira, Ze Ye, Al Katz, Alexandra Alimova, Hui Wei, Gabor T. Herman, and Paul Gottlieb

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Developmental transitions in amygdala PKC isoforms and AMPA receptor expression associated with threat memory in infant rats, Maya Opendak, Roseanna M. Zanca, Eben Anane, Peter Serrano, and Regina M. Sullivan

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Dissipation Effects in Schrödinger and Quantal Density Functional Theories of Electrons in an Electromagnetic Field, Xiao-Yin Pan and Viraht Sahni

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IL-24 Promotes Apoptosis through cAMP-Dependent PKA Pathways in Human Breast Cancer Cells, Leah Persaud, Jason Mighty, Xuelin Zhong, Ashleigh Francis, Marifer Mendez, Hilal Muharam, Stephen M. Redenti, Dibash Das, Bertal Huseyin Aktas, and Moira Sauane

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The Variability of Neural Responses to Naturalistic Videos Change with Age and Sex, Agustin Petroni, Samantha Cohen, Lei Ai, Nicolas Langer, Simon Henin, Tamara Vanderwal, Michael P. Milham, and Lucas C. Parra

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A Dexterous, Glove-Based Teleoperable Low-Power Soft Robotic Arm for Delicate Deep-Sea Biological Exploration, Brennan T. Phillips, Kaitlyn P. Becker, Shunichi Kurumaya, Kevin C. Galloway, Griffin Whittredge, Daniel M. Vogt, Clark B. Teeple, Michelle H. Rosen, Vincent A. Pieribone, David F. Gruber, and Robert J. Wood

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Predicting serious rare adverse reactions of novel chemicals, Aleksandar Poleksic and Lei Xie

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Traditional and Innovative Interlibrary Loan Services for Twenty-first Century Graduate Students, Beth Posner

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Estimation of Consistent Global Microwave Land Surface Emissivity from AMSR-E and AMSR2 Observations, Satya Prakash, Hamidreza Norouzi, Marzi Azarderakhsh, Reginald Blake, Catherine Prigent, and Reza Khanbilvardi

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Local adaptation in mainland anole lizards: Integrating population history and genome–environment associations, Ivan Prates, Anna Penna, Miguel Trefaut Rodrigues, and Ana Carolina Carnaval

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Nanoparticles as multimodal photon transducers of ionizing radiation, Edwin C. Pratt, Travis M. Shaffer, Qize Zhang, Charles Michael Drain, and Jan Grimm

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Essential Methods for Planning Practitioners: Skills and Techniques for Data Analysis, Visualization, and Communication, Laxmi Ramasubramanian and Jochen Albrecht

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The Politics of Twilights: Notes on the Semiotics of Horizon Photography, Michael W. Raphael

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Rhetoric, Salience and the Reader in the Saddle: A Response to James Phelan, David Richter

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Unravelling the secret of seedbased gels in water: the nanoscale 3D network formation, Malick Samateh, Neethu Pottackal, Setareh Manafirasi, Adiyala Vidyasagar, Charles Maldarelli, and George John

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How Songbirds Learn to Sing Provides Suggestions for Designing Team Projects for Computing Courses, Ashwin Satyanarayana, Radhika Natarajan, and Lior Baron

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PRMT5-mediated regulation of developmental myelination, Antonella Scaglione, Julia Patzig, Jialiang Liang, Rebecca Frawley, Jabez Bok, Angeliki Mela, Camila Yattah, Jingxian Zhang, Shun Xie Teo, Ting Zhou, Shuibing Chen, Emily Bernstein, Peter Canoll, Ernesto Guccione, and Patricia Casaccia

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Occupational Health Psychology, Irvin Sam Schonfeld

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When We Say 'Physician Burnout,' We Really Mean Depression, Irvin Sam Schonfeld

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What is the Difference Between Depression and Burnout? An Ongoing Debate, Irvin Sam Schonfeld, Renzo Bianchi, and Stefano Palazzi

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Burnout Research: Eyes Wide Shut, Irvin Sam Schonfeld, Eric Laurent, and Renzo Bianchi

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Beyond the Left: Documenting American Racism in Print Periodicals at the Wisconsin Historical Society, and Theorizing (Radical) Collections Today, Alycia Sellie

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Explaining the Illusion of Phenomenal Consciousness, Daniel S. Shabasson

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Microtubule Imaging Reveals Cytoskeletal Deficit Predisposing the Retinal Ganglion Cell Axons to Atrophy in DBA/2J, Denis Sharoukhov, Festa Bucinca-Cupallari, and Hyungsik Lim

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Disability Crossover: Is There a Hispanic Immigrant Health Advantage that Reverses from Working to Old Age?, Mara Getz Sheftel and Frank W. Heiland

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The Doctoral Dissertation and Scholarly Communication: Adapting to Changing Publication Practices Among Graduate Students, Roxanne Shirazi

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Challenges to the Study of Long Wars, Zachary C. Shirkey

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Introduction: The Puzzle of War Duration, Zachary C. Shirkey

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Turning to Political Violence: The Emergence of Terrorism by Marc Sageman (review), Zachary C. Shirkey

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Which Wars Spread? Commitment Problems and Military Intervention, Zachary C. Shirkey

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Kinetic Effects in 2D and 3D Quantum Dots: Comparison between High and Low Electron Correlation Regimes, Marlina Slamet and Viraht Sahni

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Study of the Kinetic Energy Densities of Electrons as Applied to Quantum Dots in a Magnetic Field, Marlina Slamet and Viraht Sahni

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A Blueprint on Self-Exploration to Justice: Introduction to “Referencing Audre Lorde” & “Lesbian Librarianship for All”, Shawn(ta) Smith-Cruz

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Lesbian Librarianship for All: A Manifesto, Shawn(ta) Smith-Cruz

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Referencing Audre Lorde, Shawn(ta) Smith-Cruz

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Carbonic anhydrase inhibition selectively prevents amyloid b neurovascular mitochondrial toxicity, María E. Solesio, Pablo M. Peixoto, Ludovic Debure, Stephen M. Madamba, Mony J. de Leon, Thomas Wisniewski, Evgeny V. Pavlov, and Silvia Fossati

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Public Land Revisited: Municipalization and Privatization in Newark and New York City, Samuel Stein and Oksana Mironova

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Is There “Hope for Every Addicted American”? The New U.S. War on Drugs, B Stone

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Cooperative standing-horizontalstanding reentrant transition for numerous solid particles under external vibration, Satoshi Takatori, Hikari Baba, Takatoshi Ichino, Chwen-Yang Shew, and Kenichi Yoshikawa

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Poster: Towards safe refactoring for intelligent parallelization of Java 8 streams, Yiming Tang, Raffi T. Khatchadourian, Mehdi Bagherzadeh, and Syed Ahmed

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Poster: Towards safe refactoring for intelligent parallelization of Java 8 streams, Yiming Tang, Raffi T. Khatchadourian, Mehdi Bagherzadeh, and Syed Ahmed

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Luciferin production and luciferase transcription in the bioluminescent copepod Metridia lucens, Michael Tessler, Jean P. Gaffney, Jason M. Crawford, Eric Trautman, Nehaben A. Gujarati, Philip Alatalo, Vincent A. Pierbone, and David F. Gruber

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Collective adhesion and displacement of retinal progenitor cells upon extracellular matrix substrates of transplantable biomaterials, Ankush Thakur, Shawn Mishra, Juan Pena, Jing Zhou, Stephen Redenti, Robert Majeska, and Maribel Vazquez

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Collective adhesion and displacement of retinal progenitor cells upon extracellular matrix substrates of transplantable biomaterials, Ankush Thakur, Shawn Mishra, Juan Pena, Jing Zhou, Stephen Redenti, Robert Majeska, and Maribel Vazquez

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Anchored phylogenomics illuminates the skipper butterfly tree of life, Emmanuel F. A. Toussaint, Jesse W. Breinholt, Chandra Earl, Andrew D. Warren, Andrew V. Z. Brower, Masaya Yago, Kelly M. Dexter, Marianne Espeland, Naomi E. Pierce, David J. Lohman, and Akito Y. Kawahara

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Book Review: Theory for the Working Sociologist, Joseph van der Naald

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A Web-Based Interactive Tool to Reduce Childhood Obesity Risk in Urban Minority Youth: Usability Testing Study, Sandra Verdaguer, Katrina F. Mateo, Katarzyna Wyka, Tracy A. Dennis, and May May Leung

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Translingual Practices and Neoliberal Policies: Attitudes and Strategies of African Skilled Migrants in Anglophone Workplaces, Sara Vogel

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An Expanded View of Translanguaging: Leveraging the Dynamic Interactions Between a Young Multilingual Writer and Machine Translation Software, Sara Vogel, Laura Ascenzi-Moreno, and Ofelia García

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We Got This: Toward a Facilitator-Youth Apprenticeship Approach Supporting Collaboration and Design Challenges in Youth-Designed Mobile Location-Based Games, Sara Vogel and Judy Perry

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Shipboard design and fabrication of custom 3D-printed soft robotic manipulators for the investigation of delicate deep-sea organisms, Daniel M. Vogt, Kaitlyn P. Becker, Brennan T. Phillips, Moritz A. Graule, Randi D. Rotjan, Timothy M. Shank, Erik E. Cordes, Robert J. Wood, and David F. Gruber

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Associations of lifestyle and vascular risk factors with Alzheimer's brain biomarker changes during middle age: a 3 year longitudinal study in the broader New York City area, Michelle J. Walters, Joanna Sterling, Crystal Quinn, Christine Ganzer, Ricardo S. Osorio, Randolph D. Andrews, Dawn C. Matthews, Shankar Vallabhajosula, Mony J. de Leon, Richard S. Isaacson, and Lisa Mosconi

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On the Relationship between Economics and Ethics, Mark D. White

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No time for college? An investigation of time poverty and parenthood, Claire Wladis, Alyse C. Hachey, and Katherine Conway

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Numerical Study of the Interplay between Thermo-topographic Slope Flow and Synoptic Flow on Canopy Transport Processes, Xiyan Xu, Chuixiang Yi, Leonardo Montagnani, and Eric Kutter