Publications and Research
Works from 2021
An Empirical Study of Refactorings and Technical Debt in Machine Learning Systems, Yiming Tang, Raffi T. Khatchadourian, Mehdi Bagherzadeh, Rhia Singh, Ajani Stewart, and Anita Raja
Works from 2020
Philosophical Perspectives, Jochen Albrecht
Actor Concurrency Bugs: A Comprehensive Study on Symptoms, Root Causes, API Usages, and Differences, Mehdi Bagherzadeh, Nicholas Fireman, Anas Shawesh, and Raffi T. Khatchadourian
Postdisaster Futures: Hopeful Pessimism, Imperial Ruination, and La futura cuir, Yarimar Bonilla
The coloniality of disaster: Race, empire, and the temporal logics of emergency in Puerto Rico, USA, Yarimar Bonilla
Collection Development at Two Armenian University Libraries: A Conversation with Librarians and Faculty, John Carey, D. Aram Donabedian, and Arshak Balayan
Use, Perceptions, and Awareness of LibGuides among Undergraduate and Graduate Health Professions Students, John Carey, Ajatshatru Pathak, and Sarah C. Johnson
Childhood Memories of Playful Antics and Punishable Acts Risking an Imperfect Future of Teaching and Learning, Lisa Farley, Debbie Sonu, Julie Garlen, and Sandra Chang-Kredl
COVID-19 in Prisons and Jails in the United States, Laura Hawks, Steffie Woolhander, and Danny McCormick
2020 Supplementary Directory of New Bargaining Agents and Contracts in Institutions of Higher Education, 2013-2019, William A. Herbert, Jacob Apkarian, and Joseph van der Naald
Social Work Librarians Promoting Social Justice through Critical Information Literacy, Sarah C. Johnson and Stephen Maher MLIS
Federalism as a Double-Edged Sword: The Slow Energy Transition in the United States, Roger Karapin
Safe Automated Refactoring for Intelligent Parallelization of Java 8 Streams, Raffi T. Khatchadourian, Yiming Tang, and Mehdi Bagherzadeh
An Empirical Study on the Use and Misuse of Java 8 Streams, Raffi T. Khatchadourian, Yiming Tang, Mehdi Bagherzadeh, and Baishakhi Ray
An Empirical Study on the Use and Misuse of Java 8 Streams, Raffi T. Khatchadourian, Yiming Tang, Mehdi Bagherzadeh, and Baishakhi Ray
Preliminary Efficacy of Motivational Interviewing on Problem Drinkers 55 and Older compared to Younger Counterparts, Alexis Kuerbis, Sijing Shao, Nehal Vadhan, and Jon Morgenstern
Lake Volume Data Analyses: A Deep Look into the Shrinking and Expansion Patterns of Lakes Azuei and Enriquillo, Hispaniola, Mahrokh Moknatian and Michael Piasecki
Teaching World Communities as Cultural Translation: A Third Grade Unit of Study, Hanadi Shatara and Debbie Sonu
Playing Slavery in First Grade: When “Developmental Appropriateness” Goes Awry in the Progressive Classroom, Debbie Sonu
A positive impact during COVID-19 pandemic: a virtual cataloger's experiences, Wendy W. Tan
Daerim Dong as a Chinatown: Setbacks and Challenges, Wendy W. Tan
A role for retinoids in the treatment of COVID-19?, Steven E. Trasino
Social Work/Public Library Partnerships: Patron needs addressed by MSW students, Beth Wahler Ph.D.; Mary Provence MSW, LCSW; and Sarah C. Johnson MLIS, LMSW
Works from 2019
Going Big: A Large-Scale Study on What Big Data Developers Ask, Mehdi Bagherzadeh and Raffi T. Khatchadourian
Abrogation of Endogenous Glycolipid Antigen Presentation on Myelin-Laden Macrophages by D-Sphingosine Ameliorates the Pathogenesis of Experimental Autoimmune Encephalomyelitis, Yi Ban, Wenjuan Dong, Lixing Zhang, Tian Zhou, Ahmad Sabri Altiti, Khaleel Ali, David R. Mootoo, Victoria A. Biaho, Timothy Hla, Yi Ren, and Xiaojing Ma
Navegando hacia lo desconocido, Yarimar Bonilla
Puerto Rico: Necrópolis, Yarimar Bonilla
The Leaked Texts at the Heart of Puerto Rico’s Massive Protests, Yarimar Bonilla
Minimalistic supramolecular proteoglycan mimics by co-assembly of aromatic peptide and carbohydrate amphiphiles, Alexandra Brito, Yousef M. Abul-Haija, Diana Soares de Costa, Ramon Novoa-Carballal, Rui L. Reis, Rein V. Ulijn, Ricardo A. Pires, and Iva Pashkuleva
MSG-Fast: Metagenomic shotgun data fast annotation using microbial gene catalogs, Stuart M. Brown, Hao Chen, Yuhan Hao, Bobby P. Laungani, Thahmina A. Ali, Changsu Dong, Carlos Lijeron, Baekdoo Kim, Claudia Wultsch, Zhiheng Pei, and Konstantinos Krampis
Implementation Science Research Examining the Integration of Evidence-Based Practices Into HIV Prevention and Clinical Care: Protocol for a Mixed-Methods Study Using the Exploration, Preparation, Implementation, and Sustainment (EPIS) Model, April Idalski Carcone, Karin Coyle, Sitaji Gurung, Demetria Cain, Rafael E. Dilones, Laura Jadwin-Cakmak, Jeffrey T. Parsons, and Sylvie Naar
Racism in Modern Information and Communication Technologies, Jessie Daniels
Peculiar optical properties of bilayer silicene under the influence of external electric and magnetic fields, Thi-Nga Do, Godfrey Gumbs, Po-Hsin Shih, Danhong Huang, Chih-Wei Chiu, Chia-Yun Chen, and Ming-Fa Lin
The United Nations Declaration on the rights of peasants and other people working in rural areas, Marc Edelman and Priscilla Claeys
Venom Diversity and Evolution in the Most Divergent Cone Snail Genus Profundiconus, Guilia Fassio, Maria Vittoria Modica, Lou Mary, Paul Zaharias, Alexander E. Fedosov, Juliette Gorson, Yuri I. Kantor, Mandë E. Holford, and Nicolas Puillandre
Racial and Ethnic Disparities in Palliative Care: A Systematic Scoping Review, Daniel Gardner, Meredith Doherty, Gleneara Bates, Aliza Koplow, and Sarah C. Johnson
Comments from the National Center for the Study of Collective Bargaining in Higher Education and the Professions in Response to Proposed NLRB Rule Concerning Graduate Assistants and Other Student Employees, William A. Herbert and Joseph van der Naald
Innovative collaborations: Social work student interns at public libraries, Sarah C. Johnson
Partnering For Social Justice: MSW Interns in Public Libraries, Sarah C. Johnson
Partnering for Social Justice: Social Work Students’ Placement at Public Libraries, Sarah C. Johnson
The Burgeoning Information Universe: Implication for Social Work Education and Practice, Sarah C. Johnson MSLIS, LMSW; Margaret Bausman LCSW-R, MSLIS; and Sarah Laleman Ward MLIS, MA
Safe Automated Refactoring for Intelligent Parallelization of Java 8 Streams, Raffi T. Khatchadourian, Yiming Tang, Mehdi Bagherzadeh, and Syed Ahmed
Safe Automated Refactoring for Intelligent Parallelization of Java 8 Streams, Raffi T. Khatchadourian, Yiming Tang, Mehdi Bagherzadeh, and Syed Ahmed
Direct Action Housing: Exploring the History of Tenant-led Housing Struggles—on Film—in NYC, Arielle Lawson
Populism or Embedded Plutocracy? The Emerging World Order, Michael Lee
Historical Ecology and Longitudinal Research Strategies around Lake Mývatn Iceland, Thomas McGovern, George Hambrecht, and Megan Hicks
Influence of Stimulus Intensity on Multimodal Integration in the Startle Escape System of Goldfish, Camille McIntyre and Thomas Preuss
Effects of AM80 Compared to AC261066 in a High Fat Diet Mouse Model of Liver Disease, Marta Melis, Xiao-Han Tang, Steven E. Trasino, Viral M. Patel, Daniel J. Stummer, Jose Jessurun, and Lorraine J. Gudas
Eighteen Blind Library Users’ Experiences with Library Websites and Search Tools in U.S. Academic Libraries: A Qualitative Study, Adina Mulliken
Adolescent Trials Network for HIV-AIDS Scale It Up Program: Protocol for a Rational and Overview, Sylvie Naar, Jeffrey T. Parsons, and Bonita F. Stanton
Model-Based Methods to Translate Adolescent Medicine Trials Network for HIV/AIDS Interventions Findings Into Policy Recommendations: Rationale and Protocol for a Modeling Core (ATN 161), Anne M. Neilan, Kunjal Patel, Allison L. Agwu, Ingrid V. Bassett, K. Rivet Amico, Catherine M. Crespi, Aditya H. Gaur, Keith J. Horvath, Kimberly A. Powers, H. Jonathon Rendina, Lisa B. Hightow-Weidman, Xiaoming Li, Sylvie Naar, Sharon Nachman, Jeffrey T. Parsons, Kit N. Simpson, Bonita F. Stanton, Kenneth A. Freedberg, Audrey C. Bangs, Michael G. Hudgens, and Andrea L. Ciaranello
Mechanisms of hepatocellular carcinoma progression, Olorunseun O. Ogunwobi, Trisheena Harricharaan, Jeannette Huaman, Anna Galuza, Oluwatoyin Odumuwagun, Yin Tan, Grace X. Ma, and Minhhuyen T. Nguyen
Clinic-Based Delivery of the Young Men’s Health Project (YMHP) Targeting HIV Risk Reduction and Substance Use Among Young Men Who Have Sex with Men: Protocol for a Type 2, Hybrid Implementation-Effectiveness Trial, Jeffrey T. Parsons, Tyrel Starks, Sitaji Gurung, Demetria Cain, Jonathan Marmo, and Sylvie Naar
Geoarchaeological Evidence of Middle-Age Tsunamis at Stromboli and Consequences for the Tsunami Hazard in the Southern Tyrrhenian Sea, M. Rosi, S. T. Levi, M. Pistolesi, A. Bertagnini, D. Brunelli, V. Cannavo, A. Di Renzoni, F. Ferranti, A. Renzulli, and D. Yoon
Advances in geometric techniques for analyzing blebbing in chemotaxing Dictyostelium cells, Zully Santiago, John Loustau, David Meretzky, Devarshi Rawal, and Derrick Brazill
Examination of Human Health Impacts Due to Adverse Climate Events Through the Use of Vulnerability Mapping: A Scoping Review, Michael T. Schmeltz and Peter J. Marcotullio
Changes in Functional Connectivity Following Treatment With Emotion Regulation Therapy, Matthew A. Scult, David M. Fresco, Faith M. Gunning, Conor Liston, Saren H. Seeley, Emmanuel Garcia, and Douglas S. Mennin
'Constructing Global Order: Agency and Change in World Politics' by Amitav Acharya (review), Zachary C. Shirkey
Social Justice, Debbie Sonu
The Outsider Within: Thoughts and Musings on Exclusion as Stranger-Making, Debbie Sonu
Effects of the KCNQ channel opener ezogabine on functional connectivity of the ventral striatum and clinical symptoms in patients with major depressive disorder, Aaron Tan, Sara Costi, Laurel S. Morris, Nicholas T. Van Dam, Marin Kautz, Alexis E. Whitton, Allyson K. Friedman, Katherine A. Collins, Gabriella Ahle, Nisha Chadha, Brian Do, Diego A. Pizzagalli, Dan V. Iosifescu, Eric J. Nestler, Ming-Hu Han, and James W. Murrough
Dominion Road in Auckland, New Zealand and Chinese Community, Wendy W. Tan
Incheon Chinatown: Cultural Heritage of this Korea's First Chinatown, Wendy W. Tan
Crowd wisdom enhanced by costly signaling in a virtual rating system, Ofer Tchernichovski, Lucas C. Parra, Daniel Fimiarz, Arnon Lotem, and Dalton Conley
Extreme events reveal an alimentary limit on sustained maximal human energy expenditure, Caitlin Thurber, Lara R. Dugas, Cara Ocobock, Bryce Carlson, John R. Speakman, and Herman Pontzer
Works from 2018
Fair Use as Creative Muse: An Ongoing Case Study, Malin Abrahamsson and Stephanie Margolin
GIS Project Management, Jochen Albrecht
Open Source Foundations for Spatial Decision Support Systems, Jochen Albrecht
Enabling precision medicine via standard communication of HTS provenance, analysis, and results, Gil Alterovitz, Dennis Dean, Carole Globe, Michael R. Crusoe, Stiam Soiland-Reyes, Amanda Bell, Anais Hayes, Anita Suresh, Anjan Purkkayastha, Charles H. King, Dan Taylor, Elaine Johanson, Elaine E. Thompson, Eric Donaldson, Hiroki Morizono, Hsinyi Tsang, Jeet K. Vora, Jeremy Goecks, Jianchao Yao, Jonas S. Almeida, Jonathon Keeney, KanakaDurga Addepalli, Konstantinos Krampis, Krista M. Smith, Lydia Guo, Mark Walderhaug, Marco Schito, Matthew Ezewudo, Nuria Guimera, Paul Walsh, Robel Kahsay, Srikanth Gottipati, Timothy C. Rodwell, Toby Bloom, Yuching Lai, Vahan Simonyan, and Raja Mazumder
Chronic voluntary oral methamphetamine induces deficits in spatial learning and hippocampal protein kinase Mzeta with enhanced astrogliosis and cyclooxygenase-2 levels, Jorge A. Avila, Roseanna M. Zanca, Denis Shor, Nicholas Paleologos, Amber A. Alliger, Maria E. Figueiredo-Pereira, and Peter A. Serrano
A description of nesting behaviors, including factors impacting nest site selection, in black‐and‐white ruffed lemurs (Varecia variegata), Andrea L. Baden
Facilitating Video Analysis for Teacher Development: A Systematic Review of the Research, Laura H. Baecher, Shiao-Chuan Kung, Sarah Laleman Ward, and Kimberly Kern
Bad Bunny, Good Scapegoat: How 'El Conejo Malo' Is Stirring a 'Moral Panic' in Post-Hurricane Puerto Rico, Yarimar Bonilla
Leveraging PET to image folate receptor α therapy of an antibody-drug conjugate, Christian Brand, Ahmad Sadique, Jacob L. Houghton, Kishore Gangagari, Jose F. Ponte, Jason S. Lewis, Naga Vara Kishore Pillarsetty, Joseph A. Konner, and Thomas Reiner
Target engagement imaging of PARP inhibitors in small-cell lung cancer, Brandon Carney, Susanne Kossatz, Benjamin H. Lok, Valentina Schneeberger, Kishore K. Gangangari, Naga Vara Kishore Pillarsetty, Wolfgang A. Weber, Charles M. Rudin, John T. Poirier, and Thomas Reiner
Primordial origin and diversification of plasmids in Lyme disease agent bacteria, Sherwood R. Casjens, Lia Di, Saymon Akther, Emmanuel F. Mongodin, Benjamin J. Luft, Steven E. Schutzer, Claire M. Fraser, and Weigang Qiu
Prostaglandin D2/J2 signaling pathway in a rat model of neuroinflammation displaying progressive parkinsonian-like pathology: potential novel therapeutic targets, Chuhyon Corwin, Anastasia Nikolopoulou, Allen L. Pan, Mariela Nunez-Santos, Shankar Vallabhajosula, Peter A. Serrano, John Babich, and Maria E. Figueiredo-Pereira
The algorithmic rise of the “alt-right”, Jessie Daniels
W.E.B. DuBois for the Twenty‐First Century: On Being a Scholar‐Activist in the Digital Era, Jessie Daniels
When the Far-Right Attacks Faculty Online, They are Attacking Public Higher Education, Jessie Daniels
White Women, U.S. Popular Culture, and Narratives of Addiction, Jessie Daniels
Single olfactory receptors set odor detection thresholds, Adam Dewan, Annika Cichy, Jingji Zhang, Kayla Miguel, Paul Feinstein, Dmitry Rinberg, and Thomas Bozza
Use and Awareness of Library Services among Faculty at Two Armenian Universities, D. Aram Donabedian, John Carey, and Arshak Balayan
Discriminating radiation injury from recurrent tumor with [18F]PARPi and amino acid PET in mouse models, Patrick L. Donabedian, Susanne Kossatz, John A. Engelbach, Stephen A. Jannetti, Brandon Carney, Robert J. Young, Wolfgang A. Weber, Joel R. Garbow, and Thomas Reiner
‘Haciendas and Plantations’: History and limitations of a 60-year-old taxonomy, Marc Edelman
Using Drosophila behavioral assays to characterize terebrid venompeptide bioactivity, Anders Eriksson, Prachi Anand, Juliette Gorson, Corina Grijuc, Elina Hadelia, James C. Stewart, Mandë Holford, and Adam Claridge-Chang
LIM Protein Ajuba associates with the RPA complex through direct cell cycle-dependent interaction with the RPA70 subunit, Sandy Fowler, Pascal Maguin, Sampada Kalan, and Diego Loayza
Disparities in pulmonary fibrosis care in the United States: an analysis from the Nationwide Inpatient Sample, Adam W. Gaffney, Steffie Woolhander, David Himmelstein, and Danny McCormick
TMSOTf assisted synthesis of 2’-deoxy-2’-[18F] fluoro-β-D-arabinofuranosylcytosine ([18F] FAC), Kishore K. Gangangari, John L. Humm, Steven M. Larson, and Naga Vara Kishore Pillarsetty
Evolution of the modern baboon (Papio hamadryas): A reassessment of the African Plio-Pleistocene record, Christopher C. Gilbert, Stephen R. Frost, Kelsey D. Pugh, Monya Anderson, and Eric Delson
Building Brand Kurdistan: Helly Luv, the Gender of Nationhood, and the War on Terror, Nicholas S. Glastonbury
BpWrapper: BioPerl-based sequence and tree utilities for rapid prototyping of bioinformatics pipelines, Yözen Hernández, Rocky Bernstein, Pedro Pagan, Levy Vargas, William McCaig, Girish Ramrattan, Saymon Akther, Amanda Larracuente, Lia Di, Filipe G. Vieira, and Weigang Qiu
A new insight into underlying disease mechanism through semi-parametric latent differential network model, Yong He, Jiadong Ji, Lei Xie, Xinsheng Zhang, and Fuzhong Xue
An Interview with Cesare Montecucco, Mandë Holford and Andreas Rummel
Thrive With Me: Protocol for a Randomized Controlled Trial to Test a Peer Support Intervention to Improve Antiretroviral Therapy Adherence Among Men Who Have Sex With Men, Keith J. Horvath, K. Rivet Amico, Darin Erickson, Alexandra M. Ecklund, Aldona Martinka, James DeWitt, Jeffrey McLaughlin, and Jeffrey T. Parsons
Designing a Summer Transition Program for Incoming and Current College Students on the Autism Spectrum: A Participatory Approach, Emily Hotez, Christina Shane-Simpson, Rita Obeid, Danielle DeNigris, Michael Siller, Corinna Costikas, Jonathan Pickens, Anthony Massa, Michael Giannola, Joanne D'Onofrio, and Kristen Gillespie-Lynch
Comparing Microbiome Sampling Methods in a Wild Mammal: Fecal and Intestinal Samples Record Different Signals of Host Ecology, Evolution, Melissa R. Ingala, Nancy B. Simmons, Claudia Wultsch, Konstantinos Krampis, Kelly A. Speer, and Susan L. Perkins
Disequilibrium, Adaptation, and the Norse Settlement of Greenland, Rowan Jackson, Jette Arneborg, Andrew Dugmore, Christian Madsen, Tom McGovern, Konrad Smiarowski, and Richard Streeter
MSW Interns at Public Libraries: Fostering Collaboration For Change, Sarah C. Johnson