Publications and Research

 

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Works from 2018

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Fair Use as Creative Muse: An Ongoing Case Study, Malin Abrahamsson and Stephanie Margolin

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When the Far-Right Attacks Faculty Online, They are Attacking Public Higher Education, Jessie Daniels

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Proactive Empirical Assessment of New Language Feature Adoption via Automated Refactoring: The Case of Java 8 Default Methods, Raffi T. Khatchadourian and Hidehiko Masuhara

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Which Wars Spread? Commitment Problems and Military Intervention, Zachary C. Shirkey

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Poster: Towards safe refactoring for intelligent parallelization of Java 8 streams, Yiming Tang, Raffi T. Khatchadourian, Mehdi Bagherzadeh, and Syed Ahmed

Works from 2017

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The Effect of Hydrogen Bonding in Enhancing the Ionic Affinities of Immobilized Monoprotic Phosphate Ligands, Spiro D. Alexandratos and Xiaoping Liu

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Reference Mode Preferences of Community College and Four-Year College Students, John Carey and Ajatshatru Pathak

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Plasmid diversity and phylogenetic consistency in the Lyme disease agent Borrelia burgdorferi, Sherwood R. Casjens, Eddie B. Gilcrease, Marija Vujadinovic, Emmanuel F. Mongodin, Benjamin J. Luft, Steven E. Schutzer, Claire M. Fraser, and Wei-Gang Qiu

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Demonstration of ultra-high recyclable energy densities in domain-engineered ferroelectric films, Hongbo Cheng, Jun Ouyang, Yun-Xiang Zhang, David J. Ascienzo, Yao Li, Yu-Yao Zhao, and Yuhang Ren

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Updating temporal expectancy of an aversive event engages striatal plasticity under amygdala control, Glenn Dallérac, Michael Graupner, Jeroen Knippenberg, Raquel Chacon Ruiz Martinez, Tatiane Ferreira Tavares, Lucille Tallot, Nicole El Massioui, Anna Verschueren, Sophie Höhn, Julie Boulanger Bertolus, Alex D. Reyes, Joseph E. LeDoux, Glenn E. Schafe, Lorenzo Diaz-Mataix, and Valérie Doyère

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Twitter and White Supremacy: A Love Story, Jessie Daniels

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Fibronectin and androgen receptor expression data in prostate cancer obtained from a RNA-sequencing bioinformatics analysis, Dibash K. Das, Thahmina Ali, Konstantinos Krampis, and Olorunseun O. Ogunwobi

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Nurse perception of care of hospitalized older adults – a comparative study between northern and central regions of Portugal, João Paulo de Almeida Tavares, Alcione Leite da Silva, Pedro Sá-Couto, Marie Boltz, and Elizabeth Capezuti

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Critical Time Intervention for Homeless People Making the Transition to Community Living: A Randomized Controlled Trial, Renée de Vet, Mariëlle D. Beijersbergen, Irene E. Jonker, Danielle AM Lako, Albert M. van Hemert, Daniel B. Herman, and Judith RLM Wolf

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Critical Agrarian Studies in Theory and Practice, Marc Edelman and Wendy Wolford

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The use of physical restraints in long-term care in Spain: a multi-center cross-sectional study, Gabriel J. Estévez-Guerra, Emilio Fariña-López, Eduardo Núñez-González, Manuel Gandoy-Crego, Fernando Calvo-Francés, and Elizabeth Capezuti

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The Paucity of Frugivores in Madagascar May Not Be Due to Unpredictable Temperatures or Fruit Resources, Sarah Federman, Miranda Sinnott-Armstrong, Andrea L. Baden, Colin A. Chapman, Douglas C. Daly, Alison R. Richard, Kim Valenta, and Michael J. Donoghue

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Egg discrimination along a gradient of natural variation in eggshell coloration, Daniel Hanley, Tomáš Grim, Branislav Igic, Peter Samaš, Analía V. López, Matthew D. Shawkey, and Mark E. Hauber

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The effects of asking a fertility intention question in primary care settings: a systematic review protocol, Paul A. Henning, Carolyne K. Burgess, Heidi E. Jones, and Wendy V. Norman

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The History Books Tell It? Collective Bargaining in Higher Education in the 1940s, William A. Herbert

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Reproductive history before and after HIV diagnosis: A cross-sectional study in HIV-positive women in Spain, Victoria Hernando, Belen Alejos, Marta Montero, M Jesús Pérez-Elias, José Ramón Blanco, Livia Giner, Juan Luis Gómez-Sirvent, Jose Antonio Iribarren, Enrique Bernal, and Francisco Bolumar

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Body size and lower limb posture during walking in humans, Martin Hora, Libor Soumar, Herman Pontzer, and Vladimír Sládek

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Measuring the Energy of Ventilation and Circulation during Human Walking using Induced Hypoxia, Masahiro Horiuchi, Yoshiyuki Fukuoka, Yoko Handa, Daijiro Abe, and Herman Pontzer

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Midbrain circuit regulation of individual alcohol drinking behaviors in mice, Barbara Juarez, Carole Morel, Stacy M. Ku, Yutong Liu, Hongxing Zhang, Sarah Montgomery, Hilledna Gregoire, Efrain Ribeiro, Marshall Crumiller, Ciorana Roman-Ortiz, Jessica J. Walsh, Kelcy Jackson, Denise E. Croote, Yingbo Zhu, Song Zhang, Leandro F. Vendruscolo, Scott Edward, Amanda Roberts, Georgia E. Hodes, Yongke Lu, Erin S. Calipari, Dipesh Chaudhury, Allyson K. Friedman, and Ming-Hu Han

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Pretargeting of internalizing trastuzumab and cetuximab with a 18F-tetrazine tracer in xenograft models, Outi Keinänen, Kimberly Fung, Jacob Pourat, Vilma Jallinoja, Delphine Vivier, NagaVara Kishore Pillarsetty, Anu J. Airaksinen, Jason S. Lewis, Brian M. Zeglis, and Mirkka Sarparanta

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Thermodynamic and Kinetic Analyses of Iron Response Element (IRE)-mRNA Binding to Iron Regulatory Protein, IRP1, Mateen A. Khan, William E. Walden, Elizabeth C. Theil, and Dixie J. Goss

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Automated Refactoring of Legacy Java Software to Default Methods, Raffi T. Khatchadourian and Hidehiko Masuhara

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Automated Refactoring of Legacy Java Software to Default Methods, Raffi T. Khatchadourian and Hidehiko Masuhara

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Automated Refactoring of Legacy Java Software to Default Methods, Raffi T. Khatchadourian and Hidehiko Masuhara

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Defaultification Refactoring: A Tool for Automatically Converting Java Methods to Default, Raffi T. Khatchadourian and Hidehiko Masuhara

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Detecting Broken Pointcuts Using Structural Commonality and Degree of Interest, Raffi T. Khatchadourian, Awais Rashid, Hidehiko Masuhara, and Takuya Watanabe

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Bio-Docklets: virtualization containers for single-step execution of NGS pipelines, Baekdoo Kim, Thahmina Ali, Carlos Lijeron, Enis Afgan, and Konstantinos Krampis

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Older adults and mobile technology: Factors that enhance and inhibit utilization in the context of behavioral health, Alexis Kuerbis, Adina Mulliken, Frederick Muench, Alison A. Moore, and Daniel Gardner

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Characteristics of individuals seeking a text messaging intervention for problem drinking: Adults 51 and older versus middle-aged and younger adults, Alexis Kuerbis, Katherine van Stolk-Cooke, and Frederick J. Muench

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Estrogen-activated MDM2 disrupts mammary tissue architecture through a p53-independent pathway, Nandini Kundu, Angelika Brekman, Jun Yeob Kim, Gu Xiano, Chong Gao, and Jill Bargonetti

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Action-Packed Action Research: How Comic Books, Questions, and Reflection Can Transform Information Literacy Instruction, Sarah Laleman Ward, Stephanie M. Margolin, and Mason Brown

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Going Beyond the Existing Consensus: The Use of Games in International Relations Education, Michael Lee and Zachary C. Shirkey

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Osteosarcoma cell proliferation and survival requires mGluR5 receptor activity and is blocked by Riluzole, Sally Liao, Yuleisy Ruiz, Hira Gulzar, Zarina Yelskaya, Lyes Ait Taouit, Murielle Houssou, Trisha Jaikaran, Yuriy Schvarts, Kristina Kozlitina, Upal Basu-Roy, Alka Mansukhani, and Shahana S. Mahajan

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Songbirds work around computational complexity by learning song vocabulary independently of sequence, Dina Lipkind, Anja T. Zai, Alexander Hanuschkin, Gary F. Marcus, Ofer Tchernichovski, and Richard H.R. Hahnloser

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"Where Are the Bathrooms?": Academic Library Restrooms and Student Needs, Stephanie Margolin and Jennifer Poggiali

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A randomized controlled pilot trial of different mobile messaging interventions for problem drinking, Frederick Muench, Katherine van Stolk-Cooke, Alexis Kuerbis, Gertraud Stadler, Amit Baumel, Sijing Shao, James R. McKay, and Jon Morgenstern

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“There is Nothing Inherently Mysterious about Assistive Technology”: A Qualitative Study about Blind User Experiences in US Academic Libraries, Adina Mulliken

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Faculty Visions for Teaching Web Accessibility within LIS Curricula in the United States: A Qualitative Study, Adina Mulliken and Mireille Djenno

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Cancer cell spheroids are a better screen for the photodynamic efficiency of glycosylated photosensitizers, Patrícia M. R. Pereira, Naxhije Berisha, N.V.S. Dinesh K. Bhupathiraju, Rosa Fernandes, João P.C. Tomé, and Charles Michael Drain

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Identification, validation, and targeting of the mutant p53- PARP-MCM chromatin axis in triple negative breast cancer, Wei-Gang Qiu, Alla Polotskaia, Gu Xiao, Lia Di, Yuhan Zhao, Wenwei Hu, John Philip, Ronald C. Hendrickson, and Jill Bargonetti

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MILITARY INTERVENTION IN INTERSTATE AND CIVIL WARS: A UNIFIED INTERPRETATION, Zachary C. Shirkey

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Joining by Number: Military Intervention in Civil Wars, Zachary C. Shirkey

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Gait changes in a line of mice artificially selected for longer limbs, Leah M. Sparrow, Emily Pellattt, Sabrina S. Yu, David A. Raichlen, Herman Pontzer, and Campbell Rolian

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Chinatowns in Latin America, Wendy W. Tan

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Chelator-Free Radiolabeling of SERRS Nanoparticles for Whole-Body PET and Intraoperative Raman Imaging, Matthew A. Wall, Travis Shaffer, Stefan Harmsen, Darjus-Felix Tschaharganeh, Chun-Hao Huang, Scott W. Lowe, Charles Michael Drain, and Moritz F. Kircher

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Transgender and Gender Nonconforming Youths’ Public Facilities Use and Psychological Well-Being: A Mixed-Method Study, Lance S. Weinhardt, Patricia Stevens, Hui Xie, Linda M. Wesp, Steven A. John, Immaculate Apchemengich, David Kioko, Shannon Chavez-Korell, Katherine M. Cochran, Jennifer M. Watjen, and Nickolas H. Lambrou

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A Mendelian randomization study of the effect of calcium on coronary artery disease, myocardial infarction and their risk factors, Lin Xu, Shi Lin Lin, and C. Mary Schooling

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RedeAmericas: building research capacity in young leaders for sustainable growth in community mental health services in Latin America, L. Yang, C. Pratt, E. Valencia, S. Conover, R. Fernández, M.S. Burrone, M.T. Cavalcanti, G. Lovisi, G. Rojas, R. Alvarado, S. Galea, L. N. Price, and E. Susser

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Bow-tie signaling in c-di-GMP: Machine learning in a simple biochemical network, Jinyuan Yan, Maxime Deforet, Kerry E. Boyle, Rayees Rahman, Raymond Liang, Chinweike Okegbe, Lars E. P. Dietrich, Weigang Qiu, and Joao B. Xavier

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Persistent amygdala novelty response is associated with less anterior cingulum integrity in trauma-exposed women, Seungyeon A. Yoon and Mariann R. Weierich

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Insights into the binding mode of MEK type-III inhibitors. A step towards discovering and designing allosteric kinase inhibitors across the human kinome, Zheng Zhao, Lei Xie, and Philip E. Bourne

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The farnesoid X receptor negatively regulates osteoclastogenesis in bone remodeling and pathological bone loss, Ting Zheng, Ju-Hee Kang, Jung-Sun Sim, Jung-Woo Kim, Jeong-Tae Koh, Chan Soo Shin, Hyungsik Lim, and Mijung Yim

Works from 2016

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Investigation of Electric Field–Induced Structural Changes at Fe-Doped SrTiO3 Anode Interfaces by Second Harmonic Generation, David Ascienzo, Haochen Yuan, Steven Greenbaum, Thorsten J. Bayer, Russell A. Maier, Jian-Jun Wang, Clive A. Randall, Elizabeth C. Dickey, Haibin Zhao, and Yuhang Ren

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Eating in East Harlem: An Assessment of Changing Foodscapes in Community District 11, 2000-2015, CUNY Urban Food Policy Institute At the CUNY School of Public Health and Health Policy, Nicholas Freudenberg, Melissa Fuster, Diana Johnson, Marissa Sheldon, Michele Silver, Apoorva Srivastava, Janet Poppendieck, Ashley Rafalow, and Nevin Cohen

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Women in the GIS Profession, Livia Betancourt-Mazur and Jochen Albrecht

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The Trouble with White Feminism: Whiteness, Digital Feminism and the Intersectional Internet, Jessie Daniels

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Intronic cleavage and polyadenylation regulates gene expression during DNA damage response through U1 snRNA, Emral Devany, Ji Yeon Park, Michael R. Murphy, George Zakusilo, Jorge Baquero, Xiaokan Zhang, Mainul Hoque, Bin Tian, and Frida E. Kleiman

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Untangling the Relationship Between Antiretroviral Therapy Use and Incident Pregnancy: A Marginal Structural Model Analysis Using Data From 47,313 HIV-Positive Women in East Africa, Batya Elul, Kara K. Wools-Kaloustian, Yingfeng Wu, Beverly S. Musick, Harriet Nuwagaba-Biribonwoha, Denis Nash, Samuel Ayaya, Elizabeth Bukusi, Pius Okong, Juliana Otieno, Deo Wabwire, Andrew Kambugu, and Constantin T. Yiannoutsos

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Statistical learning in songbirds: from self-tutoring to song culture, Olga Fehér, Iva Ljubičić, Kenta Suzuki, Kazuo Okanoya, and Ofer Tchernichovski

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Oil & Gas Drilling in National Parks, Elizabeth Ann Glass Geltman

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INQUIRY INTO THE IMPLEMENTATION OF BUSH’S EXECUTIVE ORDER 13211 AND THE IMPACT ON ENVIRONMENTAL AND PUBLIC HEALTH REGULATION, Elizabeth Ann Glass Geltman, Gunwant Gill, and Miriam Jovanovic

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Beyond Baby Steps An Empirical Study of the Impact of Environmental Justice Executive Order 12898, Elizabeth Ann Glass Geltman, Gunwant Gill, and Miriam Jovanovic

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Sexual behavior varies between same-race and different-race partnerships: A daily diary study of highly sexually active Black, Latino, and White gay and bisexual men, Christian Grov, Demetria Cain, H. Jonathan Rendina, Ana Ventuneac, and Jeffrey T. Parsons

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How different are men who do not know their HIV status from those who do? Results from an U.S. online study of gay and bisexual men, Christian Grov, H. Jonathon Rendina, and Jeffrey T. Parsons

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The Winds of Changes Shift: An Analyis of Recent Growth in Bargaining Units and Representation Efforts in Higher Education, William A. Herbert

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Just Cause Discipline for Social Networking in the New Guilded Age: Will the Law Look the Other Way?, William A. Herbert and Alicia McNally

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Automated Refactoring of Legacy Java Software to Enumerated Types, Raffi T. Khatchadourian

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An overview of causal directed acyclic graphs for substance abuse researchers, Michael Lewis and Alexis Kuerbis

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Classroom space, in the library, Stephanie Margolin

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10 Research Experiences: An Active and Applicable Alternative to the "Laundry List", Stephanie M. Margolin and Sarah Laleman Ward

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Characterization and Recombinant Expression of Terebrid Venom Peptide from Terebra guttata, John Moon, Juliette Gorson, Mary Elizabeth Wright, Laurel Yee, Samer Khawaja, Hye Young Shin, Yasmine Karma, Rajeeva Lochan Musunri, Michelle Yun, and Mandë Holford

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Technology, Diversity, Web Accessibility, and ALA Accreditation Standards in MLIS, Adina Mulliken

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Hypersexual, sexually compulsive, or just highly sexually active? Investigating three distinct groups of gay and bisexual men and their profiles of HIV-related sexual risk, Jeffrey T. Parsons, H. Jonathan Rendina, Ana Ventuneac, Raymond L. Moody, and Christian Grov

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Mechanism of Action and Applications of Interleukin 24 in Immunotherapy, Leah Persaud, Dayenny De Jesus, Oliver Brannigan, Maria Richiez-Paredes, Jeannette Huaman, Giselle Alvarado, Linda Riker, Gissete Mendez, Jordan Dejoie, and Moira Sauane

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Forgotten memories of a social justice education: Difficult knowledge and the impossibilities of school and research, Debbie Sonu

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The quasi-human child: How normative conceptions of childhood enabled neoliberal school reform in the United States, Debbie Sonu

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Editorial: Learn, by listening to the child in neoliberal schools, Debbie Sonu, Julie Gorlewski, and Daniel Vallée

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The Fragility of Ecological Pedagogy: Elementary Social Studies Standards and Possibilities of New Materialism, Debbie Sonu and Nathan Snaza

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Impressions about Dubai: A Narrative Account, Wendy W. Tan

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Urban Chinatowns in Europe: with Cases in London and Paris, Wendy W. Tan

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Predicted molecular signaling guiding photoreceptor cell migration following transplantation into damaged retina, Uchenna John Unachukwu, Alice Warren, Ze Li, Shawn Mishra, Jing Zhou, Moira Sauane, Hyungsik Lim, Maribel Vazquez, and Stephen Redenti

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From Mollusks to Medicine: A Venomics Approach for the Discovery and Characterization of Therapeutics from Terebridae Peptide Toxins, Aida Verdes, Prachi Anand, Juliette Gorson, Stephen Jannetti, Patrick Kelly, Abba Leffler, Danny Simpson, Girish Ramrattan, and Mandë Holford

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The Potential of Forest Biomass Inversion Based on Vegetation Indices Using Multi-Angle CHRIS/PROBA Data, Qiang Wang, Yong Pang, Zengyuan Li, Guoqing Sun, Erxue Chen, and Wenge Ni-Meister

Works from 2015

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Place Matters: new social indicators, Mimi Abramovitz and Jochen Albrecht

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Geospatial Resolution of Human and Bacterial Diversity with City-Scale Metagenomics, Ebrahim Afshinnekoo, Cem Meydan, Shanin Chowdhury, Dyala Jaroudi, Collin Boyer, Nick Bernstein, Julia M. Maritz, Darryl Reeves, Jorge Gandara, Sagar Chhangawala, Sofia Ahsanuddin, Amber Simmons, Timothy Nessel, Bharathi Sundaresh, Elizabeth Pereira, Ellen Jorgensen, Sergios-Orestis Kolokotronis, Nell Kirchberger, Isaac Garcia, David Gandara, Sean Dhanraj, Tanzina Nawrin, Yogesh Saletore, Noah Alexander, Priyanka Vijay, Elizabeth M. Hénaff, Paul Zumbo, Michael Walsh, Gregory D. O'Mullan, Scott Tighe, Joel T. Dudley, Anya Dunaif, Sean Ennis, Eoghan O'Halloran, Tiago R. Magalhaes, Braden Boone, Angela L. Jones, Theodore R. Muth, Katie Schneider Paolantonio, Elizabeth Alter, Eric E. Schadt, Jeanne Garbarino, Robert J. Prill, Jane M. Carlton, Shawn Levy, and Christopher E. Mason

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Towards a Theory of GIS Program Management, Jochen Albrecht

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Intramolecular Nitrogen Delivery for the Synthesis of C-Glycosphingolipids. Application to the C-Glycoside of the Immunostimulant KRN7000, Ahmad S. Altiti and David R. Mootoo

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Tailored delivery of analgesic ziconotide across a blood brain barrier model using viral nanocontainers, Prachi Anand, Alison O’Neil, Emily Lin, Trevor Douglas, and Mandë Holford

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Library Awareness and Use Among Graduate Social Work Students: An Assessment and Action Research Project, Margaret Bausman and Sarah Laleman Ward

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NMR Studies of Solvent-Free Ceramic Composite Polymer Electrolytes—A Brief Review, Marc B. Berman and Steven Greenbaum

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A reproducible approach to high-throughput biological data acquisition and integration, Daniela Börnigen, Yo Sup Moon, Gholamali Rahnavard, Levi Waldron, Lauren McIver, Afrah Shafquat, Eric A. Franzosa, Larissa Miropolsky, Christopher Sweeney, Xochitl C. Morgan, Wendy S. Garrett, and Curtis Huttenhower

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In Vitro Mutational and Bioinformatics Analysis of the M71 Odorant Receptor and Its Superfamily, Jaclyn Bubnell, Sophie Jamet, Delia Tomoiaga, Charlotte D’Hulst, Konstantinos Krampis, and Paul Feinstein

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Size does matter: crocodile mothers react more to the voice of smaller offspring, T. Chabert, A. Colin, T. Aubin, V. Shacks, S. L. Bourquin, R. M. Elsey, J. G. Acosta, and N. Mathevon

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Connecting the Point(s), Hunts Point, Bronx, New York, Corey Clarke, Jocelyn Dupre, Leah Feder, Sarah Gelder, Nate Heffron, Stephanie Printz, Josh Thompson, and Laxmi Ramasubramanian

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Experimental Shifts in Intraclutch Egg Color Variation Do Not Affect Egg Rejection in a Host of a Non-Egg-Mimetic Avian Brood Parasite, Rebecca Croston and Mark E. Hauber