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Works from 2018

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Social science perspectives on drivers of and responses to global, Andrew K. Jorgenson, Shirley Fiske, Klaus Hubacek, Jia Li, Tom McGovern, Torben Rick, Juliet B. Schor, William Solecki, Richard York, and Ariela Zycherman

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Not Waiting for Washington: Climate Policy Adoption in California and New York, Roger Karapin

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Proactive Empirical Assessment of New Language Feature Adoption via Automated Refactoring: The Case of Java 8 Default Methods, Raffi T. Khatchadourian and Hidehiko Masuhara

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Proactive Empirical Assessment of New Language Feature Adoption via Automated Refactoring: The Case of Java 8 Default Methods, Raffi T. Khatchadourian and Hidehiko Masuhara

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A Tool for Optimizing Java 8 Stream Software via Automated Refactoring, Raffi T. Khatchadourian, Yiming Tang, Mehdi Bagherzadeh, and Syed Ahmed

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The effectiveness of critical time intervention for abused women leaving women’s shelters: a randomized controlled trial, Danielle A. M. Lako, Marielle D. Beijersbergen, Irene E. Jonker, Renee de Vet, Daniel B. Herman, Albert M. van Hemert, and Judith R. L. M. Wolf

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Oxytocin and cancer: An emerging link, Ben Lerman, Trisheena Harricharran, and Olorunseun O. Ogunwobi

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The International Conference on Intelligent Biology and Medicine (ICIBM) 2018: bioinformatics towards translational applications, Xiaoming Liu, Lei Xie, Zhijin Wu, Kai Wang, Zhongming Zhao, Jianhuan Ruan, and Degui Zhi

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Structure-activity profiling of alkaloid natural product pharmacophores against a Schistosoma serotonin receptor, Jonathan S. Marchant, Wayne W. Harding, and John D. Chan

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Comics, Questions, Action! Engaging Students and Instruction Librarians With the Comics-Questions Curriculum, Stephanie Margolin, Mason Brown, and Sarah Laleman Ward

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Adolescent Medicine Trials Network for HIV/AIDS Interventions Data Harmonization: Rationale and Development of Guidelines, Micah McCumber, Demetria Cain, Sara LeGrand, Kenneth H. Mayer, Debra A. Murphy, Matthew A. Psioda, Arlene C. Seña, Tyrel J. Starks, and Michael Hudgens

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Burning Libraries: A Community Response, Thomas H. McGovern

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What is it all for? Archaeology and Global Change Research, Thomas H. McGovern

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To switch or not to switch: Intentions to switch to injectable PrEP among gay and bisexual men with at least twelve months oral PrEP experience, Kathrine Meyers, Yumeng Wu, Atrina Brill, Theodorus Sandfort, and Sarit A. Golub

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Day-Level Associations Between Substance Use and HIV Risk Behavior Among a Diverse Sample of Transgender Women, Brett M. Millar, Devin English, Raymond L. Moody, H. Jonathon Rendina, Demetria Cain, Nadav Antebi-Gruszka, Joseph A. Carter, and Jeffrey T. Parsons

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Precocious development of self-awareness in dolphins, Rachel Morrison and Diana Reiss

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Unravelling the structure of glycosyl cations via cold-ion infrared spectroscopy, Eike Mucha, Mateusz Marianski, Fei-Fei Xu, Daniel A. Thomas, Gerard Meijer, Gert von Helden, Peter H. Seeberger, and Kevin Pagel

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Review of Recent Nuclear Magnetic Resonance Studies of Ion Transport in Polymer Electrolytes, Stephen Munoz and Steven Greenbaum

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“Our lab is the community”: Defining essential supporting infrastructure in engagement research, Donald E. Nease Jr., Dee Burton, Sarah L. Cutrona, Lauren Edmundson, Alex H. Krist, Michael Barton Laws, and Montelle Tamez

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Developmental transitions in amygdala PKC isoforms and AMPA receptor expression associated with threat memory in infant rats, Maya Opendak, Roseanna M. Zanca, Eben Anane, Peter Serrano, and Regina M. Sullivan

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Age-Tastic! An Evaluation of an Evidence-Based Intervention for Older Adults, Manoj Pardasani, Jackie Berman, and Mebane Powell

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Empowering With PrEP (E-PrEP), a Peer-Led Social Media–Based Intervention to Facilitate HIV Preexposure Prophylaxis Adoption Among Young Black and Latinx Gay and Bisexual Men: Protocol for a Cluster Randomized Controlled Trial, Viraj V. Patel, Zoë Ginsburg, Sarit A. Golub, Keith J. Horvath, Nataly Rios, Kenneth H. Mayer, Ryunh S. Kim, and Julia H. Arnsten

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Use and Awareness of Reference Management Software Among Community College Students, Ajatshatru Pathak and Sarah Johnson,

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African trypanosomes evade immune clearance by Oglycosylation of the VSG surface coat, Jason Pinger, Dragana Nešić, Liaqat Ali, Francisco Aresta-Branco, Mirjana Lilic, Shanin Chowdhury, Hee-Sook Kim, Joseph Verdi, Jayne Raper, Michael A. J. Ferguson, F. Nina Papavasiliou, and C. Erec Stebbins

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Predicting serious rare adverse reactions of novel chemicals, Aleksandar Poleksic and Lei Xie

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Nanoparticles as multimodal photon transducers of ionizing radiation, Edwin C. Pratt, Travis M. Shaffer, Qize Zhang, Charles Michael Drain, and Jan Grimm

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Phylogenetic relationships of living and fossil African papionins: Combined evidence from morphology and molecules, Kelsey D. Pugh and Christopher C. Gilbert

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Essential Methods for Planning Practitioners: Skills and Techniques for Data Analysis, Visualization, and Communication, Laxmi Ramasubramanian and Jochen Albrecht

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Factors associated with perceived accuracy of the Undetectable = Untransmittable slogan among men who have sex with men: Implications for messaging scale-up and implementation, H Jonathon Rendina and J T. Parsons

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Strains of bacterial species induce a greatly varied acute adaptive immune response: The contribution of the accessory genome, Uri Sela, Chad W. Euler, Joel Correa da Rosa, and Vincent A. Fischetti

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The Microbe Directory: An annotated, searchable inventory of microbes’ characteristics, Heba Shaaban, David A. Westfall, Rawhi Mohammad, David Danko, Daniela Bezdan, Ebrahim Afshinnekoo, Nicola Segata, and Christopher E. Mason

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Explaining the Illusion of Phenomenal Consciousness, Daniel S. Shabasson

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Microtubule Imaging Reveals Cytoskeletal Deficit Predisposing the Retinal Ganglion Cell Axons to Atrophy in DBA/2J, Denis Sharoukhov, Festa Bucinca-Cupallari, and Hyungsik Lim

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Challenges to the Study of Long Wars, Zachary C. Shirkey

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Introduction: The Puzzle of War Duration, Zachary C. Shirkey

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Turning to Political Violence: The Emergence of Terrorism by Marc Sageman (review), Zachary C. Shirkey

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Which Wars Spread? Commitment Problems and Military Intervention, Zachary C. Shirkey

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"Homosexuals Are Revolting": Stonewall, 1969, Erin Siodmak

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Maternal experiences of intimate partner violence and C-reactive protein levels in young children in Tanzania, Natalie Slopen, Jing Zhang, Samuel S. Urlacher, Gretchen De Silva, and Mona Mittal

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The Sociality of Post-Truth: Neoliberal Culture and its Rationality, Debbie Sonu

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Stranger-Making as Difference: Childhood Memories of Belonging and Exclusion by Undergraduates of Color, Debbie Sonu and Marissa Bellino

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The Hidden Curriculum in Financial Literacy: Economics, Standards, and the Teaching of Young Children, Debbie Sonu and Anand R. Marri

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Market Integration Predicts Human Gut Microbiome Attributes across a Gradient of Economic Development, Keaton Stagaman, Tara J. Cepon-Robins, Melissa A. Liebert, Theresa E. Gildner, Samuel S. Urlacher, Felicia C. Madimenos, Karen Guillemin, J. Josh Snodgrass, Lawrence S. Sugiyama, and Brendan J. M. Bohannan

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GoFish: A versatile nested PCR strategy for environmental DNA assays for marine vertebrates, Mark Y. Stoeckle, Mithun Das Mishu, and Zachary Charlop-Powers

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Poster: Towards safe refactoring for intelligent parallelization of Java 8 streams, Yiming Tang, Raffi T. Khatchadourian, Mehdi Bagherzadeh, and Syed Ahmed

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Poster: Towards safe refactoring for intelligent parallelization of Java 8 streams, Yiming Tang, Raffi T. Khatchadourian, Mehdi Bagherzadeh, and Syed Ahmed

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Chinese Garden of Friendship and Sydney’s Chinatown : Friendship and Something Beyond at Darling Harbor, Wendy W. Tan

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Melbourne’s Chinatown: Continuous Chinese Enclave For 168 Years In Australia, Wendy W. Tan

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Evidence for energetic tradeoffs between physical activity and childhood growth across the nutritional transition, Samuel S. Urlacher and Karen L. Kramer

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A Web-Based Interactive Tool to Reduce Childhood Obesity Risk in Urban Minority Youth: Usability Testing Study, Sandra Verdaguer, Katrina F. Mateo, Katarzyna Wyka, Tracy A. Dennis, and May May Leung

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Associations of lifestyle and vascular risk factors with Alzheimer's brain biomarker changes during middle age: a 3 year longitudinal study in the broader New York City area, Michelle J. Walters, Joanna Sterling, Crystal Quinn, Christine Ganzer, Ricardo S. Osorio, Randolph D. Andrews, Dawn C. Matthews, Shankar Vallabhajosula, Mony J. de Leon, Richard S. Isaacson, and Lisa Mosconi

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The diverse magneto-optical selection rules in bilayer black phosphorus, Jhao-Ying Wu, Szu-Chao Chen, Thi-Nga Do, Wu-Pei Su, Godfrey Gumbs, and Ming-Fa Lin

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Non-pharmacological solutions to sleep and circadian rhythm disruption: voiced bedside experiences of hospice and end-oflife staff caregivers, Rana Sagha Zadeh, Elizabeth Capezuti, Paul Eshelman, Nicole Woody, Jennifer Tiffany, and Ana C. Krieger

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Contextual fear memory modulates PSD95 phosphorylation, AMPAr subunits, PKMζ and PI3K differentially between adult and juvenile rats, Roseanna M. Zanca, Shirley Sanay, Jorge A. Avila, Edgar Rodriguez, Harry N. Shair, and Peter A. Serrano

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Hominoid intraspecific cranial variation mirrors neutral genetic diversity, Julia M. Zichello, Karen L. Baab, Kieran P. McNulty, Christopher J. Raxworthy, and Michael E. Steiper

Works from 2017

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The Effect of Hydrogen Bonding in Enhancing the Ionic Affinities of Immobilized Monoprotic Phosphate Ligands, Spiro D. Alexandratos and Xiaoping Liu

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Cellular Mechanisms of Cortisol-Induced Changes in Mauthner-Cell Excitability in the Startle Circuit of Goldfish, Daniel R. Bronson and Thomas Preuss

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Reference Mode Preferences of Community College and Four-Year College Students, John Carey and Ajatshatru Pathak

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Reference Mode Preferences of Community College (Two-Year) and Four-Year College Students: A Comparison Study, John Carey and Ajatshatru Pathak

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Plasmid diversity and phylogenetic consistency in the Lyme disease agent Borrelia burgdorferi, Sherwood R. Casjens, Eddie B. Gilcrease, Marija Vujadinovic, Emmanuel F. Mongodin, Benjamin J. Luft, Steven E. Schutzer, Claire M. Fraser, and Wei-Gang Qiu

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Demonstration of ultra-high recyclable energy densities in domain-engineered ferroelectric films, Hongbo Cheng, Jun Ouyang, Yun-Xiang Zhang, David J. Ascienzo, Yao Li, Yu-Yao Zhao, and Yuhang Ren

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Food Justice in the Trump Age: Priorities for Urban Food Advocates, Nevin Cohen, Janet Poppendieck, and Nicholas Freudenberg

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LemurFaceID: a face recognition system to facilitate individual identification of lemurs, David Crouse, Rachel L. Jacobs, Zach Richardson, Scott Klum, Anil Jain, Andrea L. Baden, and Stacey R. Tecot

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Updating temporal expectancy of an aversive event engages striatal plasticity under amygdala control, Glenn Dallérac, Michael Graupner, Jeroen Knippenberg, Raquel Chacon Ruiz Martinez, Tatiane Ferreira Tavares, Lucille Tallot, Nicole El Massioui, Anna Verschueren, Sophie Höhn, Julie Boulanger Bertolus, Alex D. Reyes, Joseph E. LeDoux, Glenn E. Schafe, Lorenzo Diaz-Mataix, and Valérie Doyère

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Twitter and White Supremacy: A Love Story, Jessie Daniels

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Fibronectin and androgen receptor expression data in prostate cancer obtained from a RNA-sequencing bioinformatics analysis, Dibash K. Das, Thahmina Ali, Konstantinos Krampis, and Olorunseun O. Ogunwobi

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A novel microRNA-1207-3p/FNDC1/FN1/AR regulatory pathway in prostate cancer, Dibash K. Das and Olorunseun O. Ogunwobi

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Nurse perception of care of hospitalized older adults – a comparative study between northern and central regions of Portugal, João Paulo de Almeida Tavares, Alcione Leite da Silva, Pedro Sá-Couto, Marie Boltz, and Elizabeth Capezuti

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Emotional cue validity effects: The role of neurocognitive responses to emotion, Samantha Denefrio, Akeesha Simmons, Amishi Jha, and Tracy A. Dennis-Tiwary

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Critical Time Intervention for Homeless People Making the Transition to Community Living: A Randomized Controlled Trial, Renée de Vet, Mariëlle D. Beijersbergen, Irene E. Jonker, Danielle AM Lako, Albert M. van Hemert, Daniel B. Herman, and Judith RLM Wolf

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Activistas empedernidos e intelectuales comprometidos: Ensayos sobre movimientos sociales, derechos humanos y estudios latinoamericanos, Marc Edelman

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Critical Agrarian Studies in Theory and Practice, Marc Edelman and Wendy Wolford

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The use of physical restraints in long-term care in Spain: a multi-center cross-sectional study, Gabriel J. Estévez-Guerra, Emilio Fariña-López, Eduardo Núñez-González, Manuel Gandoy-Crego, Fernando Calvo-Francés, and Elizabeth Capezuti

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The Paucity of Frugivores in Madagascar May Not Be Due to Unpredictable Temperatures or Fruit Resources, Sarah Federman, Miranda Sinnott-Armstrong, Andrea L. Baden, Colin A. Chapman, Douglas C. Daly, Alison R. Richard, Kim Valenta, and Michael J. Donoghue

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State reform and respect for the rights of the disabled people: A reflection on the Olmstead decision the case of New York state, Roseanne L. Flores

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The rising gap between rich and poor: A look at the persistence of educational disparities in the United States and why we should worry, Roseanne L. Flores

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mRNA Processing Factor CstF-50 and Ubiquitin Escort Factor p97 Are BRCA1/BARD1 Cofactors Involved in Chromatin Remodeling during the DNA Damage Response, Danae Fonseca, Jorge Baquero, Michael R. Murphy, Gamage Aruggoda, Sophia Varriano, Carmen Saplenza, Oksana Mashadova, Shadaqur Rahman, and Frida E. Kleiman

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Tunneling of hybridized pairs of electrons through a one-dimensional channel, Godfrey Gumbs, Danghong Huang, Julie Hon, M. Pepper, and Sanjeev Kumar

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Egg discrimination along a gradient of natural variation in eggshell coloration, Daniel Hanley, Tomáš Grim, Branislav Igic, Peter Samaš, Analía V. López, Matthew D. Shawkey, and Mark E. Hauber

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Medieval Iceland, Greenland, and the New Human Condition: A case study in integrated environmental humanities, Steven Hartman, A.E.J. Ogilvie, Jón Haukur Ingimundarson, A.J. Dugmore, George Hambrecht, and Thomas McGovern

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The effects of asking a fertility intention question in primary care settings: a systematic review protocol, Paul A. Henning, Carolyne K. Burgess, Heidi E. Jones, and Wendy V. Norman

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The History Books Tell It? Collective Bargaining in Higher Education in the 1940s, William A. Herbert

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Reproductive history before and after HIV diagnosis: A cross-sectional study in HIV-positive women in Spain, Victoria Hernando, Belen Alejos, Marta Montero, M Jesús Pérez-Elias, José Ramón Blanco, Livia Giner, Juan Luis Gómez-Sirvent, Jose Antonio Iribarren, Enrique Bernal, and Francisco Bolumar

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Body size and lower limb posture during walking in humans, Martin Hora, Libor Soumar, Herman Pontzer, and Vladimír Sládek

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Measuring the Energy of Ventilation and Circulation during Human Walking using Induced Hypoxia, Masahiro Horiuchi, Yoshiyuki Fukuoka, Yoko Handa, Daijiro Abe, and Herman Pontzer

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Encouraging Medicare Advantage Enrollees to Switch to Higher Quality Plans: Assessing the Effectiveness of a ‘‘Nudge’’ Letter, Benjamin L. Howell, Partha Deb, Sai Ma, Rachel O. Reid, Jesse Levy, Gerald F. Riley, Patrick H. Conway, and William H. Shrank

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RSEQREP: RNA-Seq Reports, an open-source cloud-enabled framework for reproducible RNA-Seq data processing, analysis, and result reporting, Travis L. Jensen, Michael Frasketi, Kevin Conway, Leigh Villarroel, Heather Hill, Konstantinos Krampis, and Johannes B. Goll

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Home-based pre-exposure prophylaxis (PrEP) services for gay and bisexual men: An opportunity to address barriers to PrEP uptake and persistence, Steven A. John, H Jonathon Rendina, Christina Grov, and Jeffrey T. Parsons

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Midbrain circuit regulation of individual alcohol drinking behaviors in mice, Barbara Juarez, Carole Morel, Stacy M. Ku, Yutong Liu, Hongxing Zhang, Sarah Montgomery, Hilledna Gregoire, Efrain Ribeiro, Marshall Crumiller, Ciorana Roman-Ortiz, Jessica J. Walsh, Kelcy Jackson, Denise E. Croote, Yingbo Zhu, Song Zhang, Leandro F. Vendruscolo, Scott Edward, Amanda Roberts, Georgia E. Hodes, Yongke Lu, Erin S. Calipari, Dipesh Chaudhury, Allyson K. Friedman, and Ming-Hu Han

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Pretargeting of internalizing trastuzumab and cetuximab with a 18F-tetrazine tracer in xenograft models, Outi Keinänen, Kimberly Fung, Jacob Pourat, Vilma Jallinoja, Delphine Vivier, NagaVara Kishore Pillarsetty, Anu J. Airaksinen, Jason S. Lewis, Brian M. Zeglis, and Mirkka Sarparanta

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Thermodynamic and Kinetic Analyses of Iron Response Element (IRE)-mRNA Binding to Iron Regulatory Protein, IRP1, Mateen A. Khan, William E. Walden, Elizabeth C. Theil, and Dixie J. Goss

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Algorithmically complex residually finite groups, Olga Kharlampovich, Alexei Myanikov, and Mark Sapir

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Automated Refactoring of Legacy Java Software to Default Methods, Raffi T. Khatchadourian and Hidehiko Masuhara

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Automated Refactoring of Legacy Java Software to Default Methods, Raffi T. Khatchadourian and Hidehiko Masuhara

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Automated Refactoring of Legacy Java Software to Default Methods, Raffi T. Khatchadourian and Hidehiko Masuhara

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Defaultification Refactoring: A Tool for Automatically Converting Java Methods to Default, Raffi T. Khatchadourian and Hidehiko Masuhara

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Detecting Broken Pointcuts Using Structural Commonality and Degree of Interest, Raffi T. Khatchadourian, Awais Rashid, Hidehiko Masuhara, and Takuya Watanabe

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Bio-Docklets: virtualization containers for single-step execution of NGS pipelines, Baekdoo Kim, Thahmina Ali, Carlos Lijeron, Enis Afgan, and Konstantinos Krampis

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Older adults and mobile technology: Factors that enhance and inhibit utilization in the context of behavioral health, Alexis Kuerbis, Adina Mulliken, Frederick Muench, Alison A. Moore, and Daniel Gardner

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An exploratory study of mobile messaging preferences by age: Middle-aged and older adults compared to younger adults, Alexis Kuerbis, Katherine van Stolk-Cooke, and Frederick Muench