Publications and Research
Works from 2014
Sample Limited Characterization of a Novel Disulfide- Rich Venom Peptide Toxin from Terebrid Marine Snail Terebra variegata, Prachi Anand, Alexandre Grigoryan, Mohammed H. Bhuiyan, Beatrix Ueberheide, Victoria Russell, Jose Quiñonez, Patrick Moy, Brian T. Chait, Sébastien F. Poget, and Mandë Holford
Species-level view of population structure and gene flow for a critically endangered primate (Varecia variegata), Andrea L. Baden, Sheila M. Holmes, Steig E. Johnson, Shannon E. Engberg, Edward E. Louis, and Brenda J. Bradley
Supervisor Use of Video as a Tool in Teacher Reflection, Laura H. Baecher, Bede McCormack, and Shiao-Chuan Kung
Adaptive Markov Chain Monte Carlo Sampling and Estimation in Mata, Matthew J. Baker
1424+0917_NIR_SpeX, Daniella C. Bardalez Gagliuffi
1539-0520_NIR_SpeX, Daniella C. Bardalez Gagliuffi
Comparative Population Assessments of Nautilus sp. in the Philippines, Australia, Fiji, and American Samoa Using Baited Remote Underwater Video Systems, Gregory Jeff Barord, Frederick Dooley, Andrew Dunstan, Anthony Ilano, Karen N. Keister, Heike Neumeister, Thomas Preuss, Shane Schoepfer, and Peter D. Ward
Beyond Satisfaction: Understanding and Promoting the Instructor-Librarian Relationship, Margaret Bausman, Sarah Laleman Ward, and John Pell
Nancy Huston's Danse Noire, Elizabeth Klosty Beaujour
Freeze Dried Blueberry Powder Fortification Improves the Quality of Gluten Free Snacks, Sikha Bhaduri and Khursheed Navder
Methamphetamine-induced short-term increase and long-term decrease in spatial working memory affects protein Kinase M zeta (PKMζ), dopamine, and glutamate receptors, Stephen H. Braren, Damian Drapala, Ingrid K. Tulloch, and Peter A. Serrano
Maternal overweight and obesity and risk of congenital heart defects in offspring, Jennifer Brite, Sarah Katherine Laughon, James Troendle, and James Mills
Inferring the Provenance of an Alien Species with DNA Barcodes: The Neotropical Butterfly Dryas iulia in Thailand, Noah A. Burg, Ashman Pradhan, Rebecca M. Gonzalez, Emely Z. Morban, Erica W. Zhen, Watana Sakchoowong, and David J. Lohman
Postmodern Fuzzy System Theory: A Deconstruction Approach Based on Kabbalah, Gabriel Burstein, Constantin Virgil Negoita, and Menachem Kranz
Lesions of lateral or central amygdala abolish aversive Pavlovian-to-instrumental transfer in rats, Vincent D. Campese, Jeanny Kim, Gabriel Lázaro-Muñoz, Lashawn Pena, Joseph E. LeDoux, and Christopher K. Cain
Minerals in the Foods Eaten by Mountain Gorillas (Gorilla beringei), Emma C. Cancelliere, Nicole DeAngelis, John Bosco Nkurunungi, David R. Raubenheimer, and Jessica M. Rothman
Engagement with Health Care Providers Affects Self- Efficacy, Self-Esteem, Medication Adherence and Quality of Life in People Living with HIV, Wei-Ti Chen, Dean Wantland, Paula Reid, Inge B. Corless, Lucille S. Eller, Scholastika Iipinge, William L. Holzemer, Kathleen Nokes, Elizbeth Sefcik, Marta Rivero-Mendez, Joachim Voss, Patrice Nicholas, J. Craig Phillips, John M. Brion, Caro Dawson Rose, Carmen J. Portillo, Kenn Kirksey, Kathleen M. Sullivan, Mallory O. Johnson, and Lynda Tyer-Viola
Tax structure and revenue instability: the Great Recession and the states, Howard Chernick, Cordelia Reimers, and Jennifer Tennant
From Crisis Pregnancy Centers to Teenbreaks.com: Anti-abortion Activism's Use of Cloaked Websites, Jessie Daniels
A Vision for Inclusion: An LGBT Broadband Future, Jessie Daniels and Mary L. Gray
Pioneering Digital Sociology, Jessie Daniels and Heidi Knoblauch
Engaging Academics and Reimagining Scholarly Communication for the Public Good: A Report, Jessie Daniels and Polly Thistlethwaite
BorreliaBase: a phylogeny-centered browser of Borrelia genomes, Lia Di, Pedro E. Pagan, Daniel Packer, Che L. Martin, Saymon Akther, Girish Ramrattan, Emmanuel F. Mongodin, Claire M. Fraser, Steven E. Schutzer, Benjamin J. Luft, Sherwood R. Casjens, and Wei-Gang Qiu
Characteristics and comprehensiveness of adult HIV care and treatment programmes in Asia-Pacific, sub-Saharan Africa and the Americas: results of a site assessment conducted by the International epidemiologic Databases to Evaluate AIDS (IeDEA) Collaboration, Stephany N. Duda, Amanda M. Farr, Mary Lou Lindegren, Meridith Blevins, C William Wester, Kara Wools-Kaloustian, Didier K. Ekouevi, Matthias Egger, Jennifer Hemingway-Foday, David A. Cooper, Richard D. Moore, Catherine C. McGowan, and Denis Nash
Food Sovereignty: Forgotten Genealogies and Future Regulatory Challenges, Marc Edelman
Ciclos de acaparamiento de tierras en Centroamérica: Un argumento a favor de historizar y un estudio de caso del Bajo Aguán, Honduras, Marc Edelman and Andrés León
Introduction: critical perspectives on food sovereignty, Marc Edelman, Tony Weis, Amita Baviskar, Saturnino M. Borras Jr., Eric Holt-Giménez, Deniz Kandiyoti, and Wendy Wolford
The Future of Public Health Informatics: Alternative Scenarios and Recommended Strategies, Margo Edmunds, Lorna Thorpe, Martin Sepulveda, Clem Bezold, and David A. Ross
Mercy, Stuart Ewen Ph.D.
Lethal but Legal: Corporations, Consumption, and Protecting Public Health (Preface), Nicholas Freudenberg
1207-3900_NIR_SpeX, Jonathan Gagné
1207-3900_OPT_MagE, Jonathan Gagné
Evolutionary cognitive therapy versus standard cognitive therapy for depression: a protocol for a blinded, randomized, superiority clinical trial, Cezar Giosan, Oana Cobeanu, Cristina Mogoase, Vlad Muresan, Loretta S. Malta, Katarzyna Wyka, and Aurora Szentagotai
The Health Advantage of a Vegan Diet: Exploring the Gut Microbiota Connection, Marian Glick-Bauer and Ming-Chin Yeh
Strongly Localized Image States of Spherical Graphitic Particles, Godfrey Gumbs, Antonios Balassis, Andrii Iurov, and Paula Fekete
Mafia or Farmer? Coevolutionary consequences of retaliation and farming as predator strategies upon host nests by avian brood parasites, Mark E. Hauber
Functionally distinct PI 3-kinase pathways regulate myelination in the peripheral nervous system, Bradley A. Heller, Monica Ghidinelli, Jakob Voelkl, Steven Einheber, Ryan Smith, Ethan Grund, Grant Morahan, David Chandler, Luba Kalaydjieva, Filippo Giancotti, Rosalind H. King, Aniko Naray Fejes-Toth, Gerard Fejes-Toth, Maria Laura Feltri, Florian Lang, and James L. Salzer
C. elegans CEP-1/p53 and BEC-1 Are Involved in DNA Repair, Sandy Hoffman, Daniel Martin, Alicia Meléndez, and Jill Bargonetti
Remote Sensing and Ground-Based Weather Forcing Data Analysis for Streamflow Simulation, José Alberto Infante Corona, Tarendra Lakhankar, Soni M. Pradhanang, and Reza Khanbilvardi
Billing and insurance-related administrative costs in United States’ health care: synthesis of micro-costing evidence, Aliya Jiwani, David Himmelstein, Steffie Woolhandler, and James G. Kahn
Acupuncture and Multiple Sclerosis: A Review of the Evidence, H. I. Karpatkin, D. Napolione, and B. Siminovich-Blok
Rapid kinetics of iron responsive element (IRE) RNA/iron regulatory protein 1 and IRE-RNA/eIF4F complexes respond differently to metal ions, Mateen A. Khan, Jia Ma, William E. Walden, William C. Merrick, Elizabeth C. Theil, and Dixie J. Goss
Systems Biology of Cancer: A Challenging Expedition for Clinical and Quantitative Biologists, Ilya Korsunsky, Kathleen McGovern, Tom LaGatta, Loes Olde Loohuis, Terri Grosso-Applewhite, Nancy Griffeth, and Bud Mishra
BxPC3 pancreatic cancer cells express a truncated Smad4 protein upon PI3K and mTOR inhibition, Onica Legendre, Ayisha Sookdeo, and David A. Foster
Pregnancy Intent Among a Sample of Recently Diagnosed HIV-Positive Women and Men Practicing Unprotected Sex in Cape Town, South Africa, Joanne E. Mantell, Theresa M. Exner, Diane Cooper, Dan Bai, Cheng-Shiun Leu, Susie Hoffman, Landon Myer, Jennifer Moodley, Elizabeth A. Kelvin, Debbie Constant, Karen Jennings, Virginia Zweigenthal, and Zena A. Stein
Sorting Sheep and Goats in Medieval Iceland and Greenland Local Subsistence, Climate Change, or World System Impacts?, Thomas McGovern, Ramona Harrison, and Konrad Smiarowski
Gene Set Enrichment Analysis (GSEA) of Toxoplasma gondii expression datasets links cell cycle progression and the bradyzoite developmental program, Matthew McKnight Croken, Weigang Qiu, Michael W. White, and Kami Kim
A Good Compromise: Rapid and Robust Species Proxies for Inventorying Biodiversity Hotspots Using the Terebridae (Gastropoda: Conoidea), Maria Vittoria Modica, Nicolas Puillandre, Magalie Castelin, Yu Zhang, and Mandë Holford
Chronic Corticosterone Exposure Persistently Elevates the Expression of Memory-Related Genes in the Lateral Amygdala and Enhances the Consolidation of a Pavlovian Fear Memory, Melissa S. Monsey, Lara M. Boyle, Melinda L. Zhang, Caroline P. Nguyen, Hope G. Kronman, Kristie T. Ota, Ronald S. Duman, Jane R. Taylor, and Glenn E. Schafe
Naïve hosts of avian brood parasites accept foreign eggs, whereas older hosts fine-tune foreign egg discrimination during laying, Csaba Moskát, Miklós Bán, and Mark E. Hauber
Engagement with Care, Substance Use, and Adherence to Therapy in HIV/AIDS, Patrice K. Nicholas, Suzanne Willard, Clinton Thompson, Carol Dawson-Rose, Inge B. Corless, Dean J. Wantland, Elizabeth F. Sefcik, Kathleen M. Nokes, Kenn M. Kirksey, Mary Jane Hamilton, William L. Holzemer, Carmen J. Portillo, Marta Rivero Mendez, Linda M. Robinson, Maria Rosa, Sarie P. Human, Yvette Cuca, Emily Huang, Mary Maryland, and John Arudo
Low risk of attrition among adults on antiretroviral therapy in the Rwandan national program: a retrospective cohort analysis of 6, 12, and 18 month outcomes, Harriet Nuwagaba-Biribonwoha, Aleksandra Jakubowski, Veronicah Mudisha, Paulin Basinga, Anita Asiimwe, Denis Nash, and Batya Elul
The effect of menu labeling with calories and exercise equivalents on food selection and consumption, Charles Platkin, Ming-Chin Yeh, Kimberly Hirsch, Ellen Weiss Wiewel, Chang-Yun Lin, Ho-Jui Tung, and Victoria H. Castellanos
Capping Amyloid β‑Sheets of the Tau-Amyloid Structure VQIVYK with Hexapeptides Designed To Arrest Growth. An ONIOM and Density Functional Theory Study, Joshua A. Plumley, Jorge Ali-Torres, Gabor Pohl, and J. J. Dannenberg
Nesting behaviour influences species-specific gas exchange across avian eggshells, Steven J. Portugal, Golo Maurer, Gavin H. Thomas, Mark E. Hauber, Tomáš Grim, and Phillip Cassey
Lineage-specific interface proteins match up the cell cycle and differentiation in embryo stem cells, Angela Re, Christopher T. Workman, Levi Waldron, Alessandro Quattrone, and Søren Brunak
Review: Zinc’s Functional Significance in the Vertebrate Retina, Harris Ripps and Richard L. Chappell
Long-Distance Retinoid Signaling in the Zebra Finch Brain, Tina C. Roeske, Constance Scharff, Christopher R. Olson, Arpik Nshdejan, and Claudio V. Mello
Accelerated repair of demyelinated CNS lesions in the absence of non-muscle myosin IIB, Tomasz Rusielewicz, Jennifer Nam, Evangelos Damanakis, Gareth R. John, Cedric S. Raine, and Carmen V. Melendez-Vasquez
Host responses to interspecific brood parasitism: a by-product of adaptations to conspecific parasitism?, Peter Samas, Mark E. Hauber, Phillip Cassey, and Tomáš Grim
Sexual Motivations and Ideals Distinguish Sexual Identities within the Self-Concept: A Multidimensional Scaling Analysis, Celeste Sangiorgio, Warren A. Reich, Andrea C. Vial, and Mirko Savone
Is representativeness the right question?, C Mary Schooling and Heidi E. Jones
Nest destruction elicits indiscriminate con- versus heterospecific brood parasitism in a captive bird, Rachel C. Shaw, William E. Feeney, and Mark E. Hauber
Impedimetric Detection of Mutant p53 Biomarker-Driven Metastatic Breast Cancers under Hyposmotic Pressure, Menglu Shi, Nataly Shtraizent, Alla Polotskaia, Jill Bargonetti, and Hiroshi Matsui
Commitment Problems as a Cause of War Severity, Zachary C. Shirkey
Milk Consumption and Cardiovascular Risk Factors in Older Chinese: The Guangzhou Biobank Cohort Study, Yangbo Sun, Chaoqiang Jiang, Kar Keung Cheng, Weisen Zhang, Gabriel M. Leung, Tai Hing Lam, and Mary Schooling
Design and Development of a Linked Open Data-Based Health Information Representation and Visualization System: Potentials and Preliminary Evaluation, Binyam Tilahun, Tomi Kauppinen, Carsten Keßler, and Fleur Fritz
Expensive Errors or Rational Choices: the Pioneer Fringe in Late Viking Age Iceland, Orri Vesteinsson, Mike Church, Andrew Dugmore, Thomas McGovern, and Anthony Newton
Rational strategy for shaped nanomaterial synthesis in reverse micelle reactors, Zengyan Wei and Hiroshi Matsui
Breast cancer incidence and mortality in a transitioning Chinese population: current and future trends, O. L. Wong, Mary Schooling, Benjamin J. Cowling, and Gabriel M. Leung
Towards Structural Systems Pharmacology to Study Complex Diseases and Personalized Medicine, Lei Xie, Xiaoxia Ge, Hepan Tan, Li Xie, Yinliang Zhang, Thomas Hart, Xiaowei Yang, and Philip E. Bourne
Energy barrier at the N719-dye/CsSnI3 interface for photogenerated holes in dye-sensitized solar cells, Jin Zhang, Chunhui Yu, Lili Wang, Yizhi Li, Yuhang Ren, and Kai Shum
Works from 2013
Beholding Nietzsche: Ecce Homo, Fate, and Freedom, Christa Davis Acampora
Nietzsche, Agency, and Responsibility: “Das Thun ist Alles”, Christa Davis Acampora
Community Loss: a new social indicator, Jochen Albrecht and Mimi Abramovitz
The geography of global urban greenhouse gas emissions: An exploratory analysis, Jochen Albrecht, Peter Marcotullio, Amdrea Sarzynski, Niels Schulz, and Jake Garcia
The Role of Suburbia in the Attribution of Greenhouse Gas Emissions, Jochen Albrecht, Peter Marcotullio, Andrea Sarzynski, and Niels Schulz
0752+1612_NIR_SpeX, K. N. Allers
1102-3430_NIR_SpeX, K. N. Allers
1207-3932_NIR_SpeX, K. N. Allers
The Role of Video in Early Field Experiences, Laura H. Baecher, Shiao-Chuan Kung, Abigail M. Jewkes, and Christine Rosalia
Trabecular Evidence for a Human-Like Gait in Australopithecus africanus, Meir M. Barak, Daniel E. Lieberman, David Raichlen, Herman Pontzer, Anna G. Warrener, and Jean-Jacques Hublin
Infective Endocarditis in the U.S., 1998–2009: A Nationwide Study, David H. Bor, Steffie Woolhandler, Rachel Nardin, David Brusch, and David U. Himmelstein
β2 Adrenergic Receptor Fluorescent Protein Fusions Traffic to the Plasma Membrane and Retain Functionality, Jaclyn Bubnell, Patrick Pfister, Maria L. Sapar, Matthew E. Rogers, and Paul Feinstein
Scientific Communication Before and After Networked Science, John Carey
Critical Information Literacy and the Technology of Control: The Case of Armenia, John Carey and D. Aram Donabedian
Antibacterial mechanisms identified through structural systems pharmacology, Roger L. Chang, Lei Xie, Philip E. Bourne, and Bernhard O. Palsson
Burden of Disease from Toxic Waste Sites in India, Indonesia, and the Philippines in 2010, Kevin Chatham-Stephens, Jack Caravanos, Bret Ericson, Jennifer Sunga-Amparo, Budi Susilorini, Promila Sharma, Philip J. Landrigan, and Richard Fuller
Allometric Scaling and Resource Limitations Model of Tree Heights: Part 2. Site Based Testing of the Model, Sungho Choi, Xiliang Ni, Yuli Shi, Sangram Ganguly, Gong Zhang, Hieu V. Duong, Michael A. Lefsky, Marc Simard, Sassan S. Saatchi, Shihyan Lee, Wenge Ni-Meister, Shilong Piao, Chunxiang Cao, Ramakrishna R. Nemani, and Ranga B. Myneni
Speaking As One: Supporting Open Access with Departmental Resolutions, Madeline Cohen, Maura A. Smale, Jill Cirasella, Cynthia Tobar, and Jessie Daniels
From Tweet to Blog Post to Peer-Reviewed Article: How to be a Scholar Now, Jessie Daniels
Race and racism in Internet Studies: A review and critique, Jessie Daniels
Fast Quantitative Real-Time PCR-Based Screening for Common Chromosomal Aneuploidies in Mouse Embryonic Stem Cells, Charlotte D'Hulst, Irena Parvanova, Delia Tomoiaga, Maria L. Sapar, and Paul Feinstein
Seroprevalence of Epstein-Barr Virus Infection in U.S. Children Ages 6-19, 2003-2010, Jennifer Beam Dowd, Tia Palermo, Jennifer Brite, Thomas W. McDade, and Allison Aiello
Cobweb Theorems with Production Lags and Price Forecasting, Daniel Dufresne and Felisa Vázquez-Abad
High Levels of Adherence and Viral Suppression in a Nationally Representative Sample of HIV-Infected Adults on Antiretroviral Therapy for 6, 12 and 18 Months in Rwanda, Batya Elul, Paulin Basinga, Harriet Nuwagaba-Biribonwoha, Suzue Saito, Deborah Horowitz, Denis Nash, Jules Mugabo, Veronicah Mugisha, Etienne Rugigana, Richard Nkunda, and Anita Asiimwe
Association of neighborhood-level factors with hospitalization for community-associated methicillin-resistant Staphylococcus aureus, New York City, 2006: a multilevel observational study, Amanda M. Farr, Melissa A. Marx, Don Weiss, and Denis Nash
The impact of Medicare prescription drug coverage on the use of antidementia drugs, Nicole R. Fowler, Yi-Fan Chen, Christiana A. Thurton, Aiju Men, Eric G. Rodriguez, and Julie M. Donohue
curatedOvarianData: clinically annotated data for the ovarian cancer transcriptome, Benjamin Frederick Ganzfried, Markus Riester, Benjamin Haibe-Kains, Thomas Risch, Svitlana Tyekucheva, Ina Jazic, Xin Victoria Wang, Mahnaz Ahmadifar, Michael J. Birrer, Giovanni Parmigiani, Curtis Huttenhower, and Levi Waldron
Quantifying Reproducibility in Computational Biology: The Case of the Tuberculosis Drugome, Daniel Garijo, Sarah Kinnings, Li Xie, Lei Xie, Yinliang Zhang, Philip E. Bourne, and Yolanda Gil