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Works from 2017

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Fibronectin and androgen receptor expression data in prostate cancer obtained from a RNA-sequencing bioinformatics analysis, Dibash K. Das, Thahmina Ali, Konstantinos Krampis, and Olorunseun O. Ogunwobi

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A novel microRNA-1207-3p/FNDC1/FN1/AR regulatory pathway in prostate cancer, Dibash K. Das and Olorunseun O. Ogunwobi

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Nurse perception of care of hospitalized older adults – a comparative study between northern and central regions of Portugal, João Paulo de Almeida Tavares, Alcione Leite da Silva, Pedro Sá-Couto, Marie Boltz, and Elizabeth Capezuti

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Emotional cue validity effects: The role of neurocognitive responses to emotion, Samantha Denefrio, Akeesha Simmons, Amishi Jha, and Tracy A. Dennis-Tiwary

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Critical Time Intervention for Homeless People Making the Transition to Community Living: A Randomized Controlled Trial, Renée de Vet, Mariëlle D. Beijersbergen, Irene E. Jonker, Danielle AM Lako, Albert M. van Hemert, Daniel B. Herman, and Judith RLM Wolf

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Activistas empedernidos e intelectuales comprometidos: Ensayos sobre movimientos sociales, derechos humanos y estudios latinoamericanos, Marc Edelman

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Critical Agrarian Studies in Theory and Practice, Marc Edelman and Wendy Wolford

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The use of physical restraints in long-term care in Spain: a multi-center cross-sectional study, Gabriel J. Estévez-Guerra, Emilio Fariña-López, Eduardo Núñez-González, Manuel Gandoy-Crego, Fernando Calvo-Francés, and Elizabeth Capezuti

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The Paucity of Frugivores in Madagascar May Not Be Due to Unpredictable Temperatures or Fruit Resources, Sarah Federman, Miranda Sinnott-Armstrong, Andrea L. Baden, Colin A. Chapman, Douglas C. Daly, Alison R. Richard, Kim Valenta, and Michael J. Donoghue

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State reform and respect for the rights of the disabled people: A reflection on the Olmstead decision the case of New York state, Roseanne L. Flores

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The rising gap between rich and poor: A look at the persistence of educational disparities in the United States and why we should worry, Roseanne L. Flores

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mRNA Processing Factor CstF-50 and Ubiquitin Escort Factor p97 Are BRCA1/BARD1 Cofactors Involved in Chromatin Remodeling during the DNA Damage Response, Danae Fonseca, Jorge Baquero, Michael R. Murphy, Gamage Aruggoda, Sophia Varriano, Carmen Saplenza, Oksana Mashadova, Shadaqur Rahman, and Frida E. Kleiman

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Tunneling of hybridized pairs of electrons through a one-dimensional channel, Godfrey Gumbs, Danghong Huang, Julie Hon, M. Pepper, and Sanjeev Kumar

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Egg discrimination along a gradient of natural variation in eggshell coloration, Daniel Hanley, Tomáš Grim, Branislav Igic, Peter Samaš, Analía V. López, Matthew D. Shawkey, and Mark E. Hauber

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Medieval Iceland, Greenland, and the New Human Condition: A case study in integrated environmental humanities, Steven Hartman, A.E.J. Ogilvie, Jón Haukur Ingimundarson, A.J. Dugmore, George Hambrecht, and Thomas McGovern

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The effects of asking a fertility intention question in primary care settings: a systematic review protocol, Paul A. Henning, Carolyne K. Burgess, Heidi E. Jones, and Wendy V. Norman

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The History Books Tell It? Collective Bargaining in Higher Education in the 1940s, William A. Herbert

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Reproductive history before and after HIV diagnosis: A cross-sectional study in HIV-positive women in Spain, Victoria Hernando, Belen Alejos, Marta Montero, M Jesús Pérez-Elias, José Ramón Blanco, Livia Giner, Juan Luis Gómez-Sirvent, Jose Antonio Iribarren, Enrique Bernal, and Francisco Bolumar

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Body size and lower limb posture during walking in humans, Martin Hora, Libor Soumar, Herman Pontzer, and Vladimír Sládek

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Measuring the Energy of Ventilation and Circulation during Human Walking using Induced Hypoxia, Masahiro Horiuchi, Yoshiyuki Fukuoka, Yoko Handa, Daijiro Abe, and Herman Pontzer

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Encouraging Medicare Advantage Enrollees to Switch to Higher Quality Plans: Assessing the Effectiveness of a ‘‘Nudge’’ Letter, Benjamin L. Howell, Partha Deb, Sai Ma, Rachel O. Reid, Jesse Levy, Gerald F. Riley, Patrick H. Conway, and William H. Shrank

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RSEQREP: RNA-Seq Reports, an open-source cloud-enabled framework for reproducible RNA-Seq data processing, analysis, and result reporting, Travis L. Jensen, Michael Frasketi, Kevin Conway, Leigh Villarroel, Heather Hill, Konstantinos Krampis, and Johannes B. Goll

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Home-based pre-exposure prophylaxis (PrEP) services for gay and bisexual men: An opportunity to address barriers to PrEP uptake and persistence, Steven A. John, H Jonathon Rendina, Christina Grov, and Jeffrey T. Parsons

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Midbrain circuit regulation of individual alcohol drinking behaviors in mice, Barbara Juarez, Carole Morel, Stacy M. Ku, Yutong Liu, Hongxing Zhang, Sarah Montgomery, Hilledna Gregoire, Efrain Ribeiro, Marshall Crumiller, Ciorana Roman-Ortiz, Jessica J. Walsh, Kelcy Jackson, Denise E. Croote, Yingbo Zhu, Song Zhang, Leandro F. Vendruscolo, Scott Edward, Amanda Roberts, Georgia E. Hodes, Yongke Lu, Erin S. Calipari, Dipesh Chaudhury, Allyson K. Friedman, and Ming-Hu Han

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Pretargeting of internalizing trastuzumab and cetuximab with a 18F-tetrazine tracer in xenograft models, Outi Keinänen, Kimberly Fung, Jacob Pourat, Vilma Jallinoja, Delphine Vivier, NagaVara Kishore Pillarsetty, Anu J. Airaksinen, Jason S. Lewis, Brian M. Zeglis, and Mirkka Sarparanta

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Thermodynamic and Kinetic Analyses of Iron Response Element (IRE)-mRNA Binding to Iron Regulatory Protein, IRP1, Mateen A. Khan, William E. Walden, Elizabeth C. Theil, and Dixie J. Goss

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Algorithmically complex residually finite groups, Olga Kharlampovich, Alexei Myanikov, and Mark Sapir

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Automated Refactoring of Legacy Java Software to Default Methods, Raffi T. Khatchadourian and Hidehiko Masuhara

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Automated Refactoring of Legacy Java Software to Default Methods, Raffi T. Khatchadourian and Hidehiko Masuhara

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Automated Refactoring of Legacy Java Software to Default Methods, Raffi T. Khatchadourian and Hidehiko Masuhara

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Defaultification Refactoring: A Tool for Automatically Converting Java Methods to Default, Raffi T. Khatchadourian and Hidehiko Masuhara

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Detecting Broken Pointcuts Using Structural Commonality and Degree of Interest, Raffi T. Khatchadourian, Awais Rashid, Hidehiko Masuhara, and Takuya Watanabe

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Bio-Docklets: virtualization containers for single-step execution of NGS pipelines, Baekdoo Kim, Thahmina Ali, Carlos Lijeron, Enis Afgan, and Konstantinos Krampis

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A Pilot Study of Online Feedback for Adult Drinkers 50 and Older: Feasibility, Efficacy, and Preferences for Intervention, Alexis Kuerbis, Lisa Hail, Alison A. Moore, and Frederick Muench

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Testing Cross-sectional and Prospective Mediators of Internalized Heterosexism on Heavy Drinking, Alcohol Problems, and Psychological Distress Among Heavy Drinking Men Who Have Sex with Men, Alexis Kuerbis, Ethan Mereish, Marie Hayes, Christine Davis, Sijing Shao, and Jon Morgenstern

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Older adults and mobile technology: Factors that enhance and inhibit utilization in the context of behavioral health, Alexis Kuerbis, Adina Mulliken, Frederick Muench, Alison A. Moore, and Daniel Gardner

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An exploratory study of mobile messaging preferences by age: Middle-aged and older adults compared to younger adults, Alexis Kuerbis, Katherine van Stolk-Cooke, and Frederick Muench

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Characteristics of online treatment seekers interested in a text messaging intervention for problem drinking: adults 51 and older versus middle-aged and younger adults, Alexis Kuerbis, Katherine van Stolk-Cooke, and Frederick J. Muench

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Characteristics of individuals seeking a text messaging intervention for problem drinking: Adults 51 and older versus middle-aged and younger adults, Alexis Kuerbis, Katherine van Stolk-Cooke, and Frederick J. Muench

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Estrogen-activated MDM2 disrupts mammary tissue architecture through a p53-independent pathway, Nandini Kundu, Angelika Brekman, Jun Yeob Kim, Gu Xiano, Chong Gao, and Jill Bargonetti

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Action-Packed Action Research: How Comic Books, Questions, and Reflection Can Transform Information Literacy Instruction, Sarah Laleman Ward, Stephanie M. Margolin, and Mason Brown

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Multiple Baskets: Diverse Racial Frames and the 2016 Republican Primary, Michael Lee

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Going Beyond the Existing Consensus: The Use of Games in International Relations Education, Michael Lee and Zachary C. Shirkey

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Osteosarcoma cell proliferation and survival requires mGluR5 receptor activity and is blocked by Riluzole, Sally Liao, Yuleisy Ruiz, Hira Gulzar, Zarina Yelskaya, Lyes Ait Taouit, Murielle Houssou, Trisha Jaikaran, Yuriy Schvarts, Kristina Kozlitina, Upal Basu-Roy, Alka Mansukhani, and Shahana S. Mahajan

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Songbirds work around computational complexity by learning song vocabulary independently of sequence, Dina Lipkind, Anja T. Zai, Alexander Hanuschkin, Gary F. Marcus, Ofer Tchernichovski, and Richard H.R. Hahnloser

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miRNAs associated with prostate cancer risk and progression, Hung N. Luu, Hui-Yi Lin, Karina Dalsgaard Sorensen, Olorunseun O. Ogunwobi, Nagi Kumar, Ganna Chornokur, Catherine Phelan, Dominique Jones, LaCreis Kidd, Jyotsna Batra, Kosj Yamoah, Anders Berglund, Robert J. Rounbehler, Mihi Yang, Sang Haak Lee, Nahyeon Kang, Seung Joon Kim, Jong Y. Park, and Giuliano Di Pietro

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Leading from the Library Loo: An Illustrated, Documented Guide to New York CIty Academic Library Bathrooms, Stephanie M. Margolin and Jennifer Poggiali

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"Where Are the Bathrooms?": Academic Library Restrooms and Student Needs, Stephanie Margolin and Jennifer Poggiali

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Dynamical Systems Modeling to Identify a Cohort of Problem Drinkers with Similar Mechanisms of Behavior Change, Kidist Maxwell, Rebecca Everett, Sijing Shao, Alexis Kuerbis, Lyric Stephenson, H. T. Banks, and Jon Morgenstern

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Zooarchaeology of the Scandinavian settlements in Iceland and Greenland: diverging pathways, Thomas McGovern, Konrad Smairowski, George Hambrecht, Seth Brewington, Ramona Harrison, Megan Hicks, Frank J. Feeley, Brenda Prehal, and James Woollett

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Dismantling Motivational Interviewing: Effects on Initiation of Behavior Change Among Problem Drinkers Seeking Treatment, Jon Morgenstern, Alexis Kuerbis, Jessica Houser, Sijing Shao, and James R. McKay

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Lifestyle and vascular risk effects on MRI-based biomarkers of Alzheimer’s disease: a cross-sectional study of middle-aged adults from the broader New York City area, Lisa Mosconi, Michelle Walters, Joanna Sterling, Crystal Quinn, Pauline McHugh, Randolph E. Andrews, Dawn C. Matthews, Christine Ganzer, Ricardo S. Osorio, Richard S. Isaacson, Mony J. De Leon, and Antonio Convit

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A randomized controlled pilot trial of different mobile messaging interventions for problem drinking, Frederick Muench, Katherine van Stolk-Cooke, Alexis Kuerbis, Gertraud Stadler, Amit Baumel, Sijing Shao, James R. McKay, and Jon Morgenstern

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“There is Nothing Inherently Mysterious about Assistive Technology”: A Qualitative Study about Blind User Experiences in US Academic Libraries, Adina Mulliken

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Faculty Visions for Teaching Web Accessibility within LIS Curricula in the United States: A Qualitative Study, Adina Mulliken and Mireille Djenno

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Teaching Systematic Searching Methods to Public Health Graduate Students: Repeated Library Instruction Sessions Correlate With Better Assignment Scores, John Pell

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Cancer cell spheroids are a better screen for the photodynamic efficiency of glycosylated photosensitizers, Patrícia M. R. Pereira, Naxhije Berisha, N.V.S. Dinesh K. Bhupathiraju, Rosa Fernandes, João P.C. Tomé, and Charles Michael Drain

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Identification, validation, and targeting of the mutant p53- PARP-MCM chromatin axis in triple negative breast cancer, Wei-Gang Qiu, Alla Polotskaia, Gu Xiao, Lia Di, Yuhan Zhao, Wenwei Hu, John Philip, Ronald C. Hendrickson, and Jill Bargonetti

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Privacy, Trust, and Data Sharing in Web-Based and Mobile Research: Participant Perspectives in a Large Nationwide Sample of Men Who Have Sex With Men in the United States, H. Jonathon Rendina and Brian Mustanski

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Peripheral blood clinical laboratory variables associated with outcomes following combination nivolumab and ipilimumab immunotherapy in melanoma, Samuel Rosner, Erica Kwong, Alexander N. Shoushtari, Claire F. Friedman, Allison S. Betof, Mary Sue Brady, Daniel G. Coit, Margaret K. Callahan, Jedd D. Wolchok, Paul B. Chapman, Katherine S. Panageas, and Michael A. Postow

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Emancipatory Rural Politics: Confronting Authoritarian Populism, Ian Scooner, Marc Edelman, Saturnino M. Borras Jr., Ruth Hall, Wendy Wolford, and Ben White

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'Civil Wars: A History in Ideas' by David Armitage (review), Zachary C. Shirkey

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'Confounding Powers: Anarchy and International Society from the Assassins to Al Qaeda' by William J. Brennar (review), Zachary C. Shirkey

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MILITARY INTERVENTION IN INTERSTATE AND CIVIL WARS: A UNIFIED INTERPRETATION, Zachary C. Shirkey

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Joining by Number: Military Intervention in Civil Wars, Zachary C. Shirkey

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Studying the Mechanisms of Developmental Vocal Learning and Adult Vocal Performance in Zebra Finches through Lentiviral Injection, Zhimin Shi, Ofer Tchernichovski, and XiaoChing Li

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Opening Education, Linking to Communities: The #InQ13 Collective’s Participatory Open Online Course (POOC) in East Harlem, Shawn(ta) Smith-Cruz, Polly Thistlethwaite, and Jessie Daniels

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Transitions between risk management regimes in cities, William Solecki, Mark Pelling, and Matthias Garschagen

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Gait changes in a line of mice artificially selected for longer limbs, Leah M. Sparrow, Emily Pellattt, Sabrina S. Yu, David A. Raichlen, Herman Pontzer, and Campbell Rolian

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Cooperative Membership and Community Engagement: Findings from a Latin American Survey, Sangdong Tak

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Chinatowns in Latin America, Wendy W. Tan

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Climate Change Across Seasons Experiment (CCASE): A new method for simulating future climate in seasonally snow-covered ecosystems, Pamela H. Templer, Andrew B. Reinmann, Rebecca Sanders-DeMott, Patrick O. Sorensen, Stephanie M. Juice, Francis Bowles, Laura E. Sofen, Jamie L. Harrison, Ian Halm, Lindsey Rustad, Mary E. Martin, and Nicholas Grant

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Sexual dimorphism in striatal dopaminergic responses promotes monogamy in social songbirds, Kirill Tokarev, Julia Hyland Bruno, Iva Ljubicic, Paresh J. Kothari, Santosh A. Helekar, Ofer Tchernichovski, and Henning U. Voss

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Are Fireworms Venomous? Evidence for the Convergent Evolution of Toxin Homologs in Three Species of Fireworms (Annelida, Amphinomidae), Aida Verdes, Danny Simpson, and Mandë Holford

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Poesía amorosa de una erudita del XVII: traducción y creación en El Pastor Fido de Isabel Correa, Almudena Vidorreta

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Chelator-Free Radiolabeling of SERRS Nanoparticles for Whole-Body PET and Intraoperative Raman Imaging, Matthew A. Wall, Travis Shaffer, Stefan Harmsen, Darjus-Felix Tschaharganeh, Chun-Hao Huang, Scott W. Lowe, Charles Michael Drain, and Moritz F. Kircher

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Transgender and Gender Nonconforming Youths’ Public Facilities Use and Psychological Well-Being: A Mixed-Method Study, Lance S. Weinhardt, Patricia Stevens, Hui Xie, Linda M. Wesp, Steven A. John, Immaculate Apchemengich, David Kioko, Shannon Chavez-Korell, Katherine M. Cochran, Jennifer M. Watjen, and Nickolas H. Lambrou

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A Mendelian randomization study of the effect of calcium on coronary artery disease, myocardial infarction and their risk factors, Lin Xu, Shi Lin Lin, and C. Mary Schooling

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RedeAmericas: building research capacity in young leaders for sustainable growth in community mental health services in Latin America, L. Yang, C. Pratt, E. Valencia, S. Conover, R. Fernández, M.S. Burrone, M.T. Cavalcanti, G. Lovisi, G. Rojas, R. Alvarado, S. Galea, L. N. Price, and E. Susser

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Bow-tie signaling in c-di-GMP: Machine learning in a simple biochemical network, Jinyuan Yan, Maxime Deforet, Kerry E. Boyle, Rayees Rahman, Raymond Liang, Chinweike Okegbe, Lars E. P. Dietrich, Weigang Qiu, and Joao B. Xavier

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Persistent amygdala novelty response is associated with less anterior cingulum integrity in trauma-exposed women, Seungyeon A. Yoon and Mariann R. Weierich

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Insights into the binding mode of MEK type-III inhibitors. A step towards discovering and designing allosteric kinase inhibitors across the human kinome, Zheng Zhao, Lei Xie, and Philip E. Bourne

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The farnesoid X receptor negatively regulates osteoclastogenesis in bone remodeling and pathological bone loss, Ting Zheng, Ju-Hee Kang, Jung-Sun Sim, Jung-Woo Kim, Jeong-Tae Koh, Chan Soo Shin, Hyungsik Lim, and Mijung Yim

Works from 2016

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A Pretargeted Approach for the Multimodal PET/NIRF Imaging of Colorectal Cancer, Pierre Adumeau, Kathryn E. Carnazza, Christian Brand, Sean D. Carlin, Thomas Reiner, Brian J. Agnew, Jason S. Lewis, and Brian M. Zeglis

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Site-Specifically Labeled Immunoconjugates for Molecular Imaging—Part 1: Cysteine Residues and Glycans, Pierre Adumeau, Sai Kiran Sharma, Colleen Brent, and Brian M. Zeglis

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Mesenchymal Stem Cell Fate: Applying Biomaterials for Control of Stem Cell Behavior, Hilary J. Anderson, Jugal Kishore Sahoo, Rein V. Ulijn, and Matthew J. Dalby

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Investigation of Electric Field–Induced Structural Changes at Fe-Doped SrTiO3 Anode Interfaces by Second Harmonic Generation, David Ascienzo, Haochen Yuan, Steven Greenbaum, Thorsten J. Bayer, Russell A. Maier, Jian-Jun Wang, Clive A. Randall, Elizabeth C. Dickey, Haibin Zhao, and Yuhang Ren

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Eating in East Harlem: An Assessment of Changing Foodscapes in Community District 11, 2000-2015, CUNY Urban Food Policy Institute At the CUNY School of Public Health and Health Policy, Nicholas Freudenberg, Melissa Fuster, Diana Johnson, Marissa Sheldon, Michele Silver, Apoorva Srivastava, Janet Poppendieck, Ashley Rafalow, and Nevin Cohen

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Molecular Mechanisms of Stress-Induced Increases in Fear Memory Consolidation within the Amygdala, Antonio V. Aubry, Peter A. Serrano, and Nesha S. Burghardt

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A Case Study of the Progressive Era Librarian Edith Guerrier: The Public Library, Social Reform, 'New Women', and Urban Immigrant Girls, Margaret Bausman

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The Social Work Librarian and Information Literacy Instruction: A Report on a National Survey in the United States, Margaret Bausman and Sarah Laleman Ward

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Finding the Beat: From Socially Coordinated Vocalizations in Songbirds to Rhythmic Entrainment in Humans, Jonathan I. Benichov, Eitan Globerson, and Ofer Tchernichovski

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HIV Glycoprotein Gp120 Impairs Fast Axonal Transport by Activating Tak1 Signaling Pathways, Sarah H. Berth, Nichole Mesnard-Hoaglin, Bin Wang, Hajwa Kim, Yuyu Song, Maria Sapar, Gerardo Morfini, and Scott T. Brady

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Women in the GIS Profession, Livia Betancourt-Mazur and Jochen Albrecht

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Eggshell pigment composition covaries with phylogeny, Kaat Brulez, Ivan Miksik, Christopher R. Cooney, Mark E. Hauber, Paul George Lovell, Golo Maurer, Steven J. Portugal, Douglas Russell, Silas James Reynolds, and Phillip Cassey

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A Primate APOL1 Variant That Kills Trypanosoma brucei gambiense, Anneli Cooper, Paul Capewell, Caroline Clucas, Nicola Veitch, William Weir, Russell Thompson, Jayne Raper, and Annette MacLeod

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The Trouble with White Feminism: Whiteness, Digital Feminism and the Intersectional Internet, Jessie Daniels

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miR-1207-3p Is a Novel Prognostic Biomarker of Prostate Cancer, Dibash K. Das, Joseph R. Osborne, Hui-Yi Lin, Jong Y. Park, and Olorunseun O. Ogunwobi

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Molecular Tracking of Individual Host Use in the Shiny Cowbird – a Generalist Brood Parasite, Ma Alicia de la Colina, Mark E. Hauber, Bill M. Strausberger, Juan Carlos Reboreda, and Bettina Mahler

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Intronic cleavage and polyadenylation regulates gene expression during DNA damage response through U1 snRNA, Emral Devany, Ji Yeon Park, Michael R. Murphy, George Zakusilo, Jorge Baquero, Xiaokan Zhang, Mainul Hoque, Bin Tian, and Frida E. Kleiman